Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1810 ATGTTTTTTGACGGATATGGGCATCACGGGAGTGACGGGACATCATTTGAGCAGATATATCGATGTTACCCCGCTTCTTTTATTGAAAAGCCCCAAATTGAGAATGGTGATAAAATTATAATGCCTCCTTCAGCCCTTGACCGTCTAGCATTTCTTCGTATTGACTATCCAATGTTGTTTGAGCTTCGAAATGGTGCTGCTGAGCGGGTTTCTCATTGTGGGGTTCTGGAGTTCATTGCAGATGAAGGCACTATATATGTTCCATACTGGATGATGCAGAATTTGCTTTTGCAAGAGGGAGACACCGTAAGAGTGAAAAATGTATCGCTTCCCAAGGGAACATATGTTAAGTTACAACCCCATACAAAGGACTTCTTCGATATTTCCAATCCAAAAGCCATCCTGGAAACTACTTTGAGAAATTTCTCATGCTTGACAACTGGAGATACTATCATGGTGACATACAACAACAGAAAGTATTACATAGATATTATAGAAACAAAACCTACTAATGCAGTAAGCATCATGGAGACAGACTGTGAGGTGGACGTCGCTCCTCCCTTGGATTACAAGAAACTTGAAAAGCCTATTGCATCTCTTGGTTCAGGCAAAGCAATAGACGAAGCTAAGTTCCACCCTTTTTTTGGAAGTGGAAGACGCTTGGATGGAAAGCCAACCCCTCCTGTTTATTCTTCATGCCCTAATGACAAGGACAAGGGACCTGATTCTTCAAATGTCAACTCACTTTCTTCTACAACATCTTGCCCTTCTCAGGGGAAGCTAGTGTTTGGATCAAATGTTTTCCGTACAAATGAAAAAGGAAAGGAAAAAACCGAGTCAAAACAAGAGCCACCCCTTCAGAAACAGTCCAAGTTCCAGCCTTTCATTGGGAAGAAGTATTCCCTAAGAGGTTGA 915 0.4175 MFFDGYGHHGSDGTSFEQIYRCYPASFIEKPQIENGDKIIMPPSALDRLAFLRIDYPMLFELRNGAAERVSHCGVLEFIADEGTIYVPYWMMQNLLLQEGDTVRVKNVSLPKGTYVKLQPHTKDFFDISNPKAILETTLRNFSCLTTGDTIMVTYNNRKYYIDIIETKPTNAVSIMETDCEVDVAPPLDYKKLEKPIASLGSGKAIDEAKFHPFFGSGRRLDGKPTPPVYSSCPNDKDKGPDSSNVNSLSSTTSCPSQGKLVFGSNVFRTNEKGKEKTESKQEPPLQKQSKFQPFIGKKYSLRG* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1810 304 Gene3D - 112 185 - -
Apr5g1810 304 MobiDBLite consensus disorder prediction 237 265 - -
Apr5g1810 304 Gene3D - 5 110 IPR042299 -
Apr5g1810 304 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 1 304 IPR004854 GO:0006511
Apr5g1810 304 MobiDBLite consensus disorder prediction 270 284 - -
Apr5g1810 304 Pfam Ubiquitin fusion degradation protein UFD1 16 187 IPR004854 GO:0006511
Apr5g1810 304 MobiDBLite consensus disorder prediction 217 304 - -
Apr5g1810 304 PANTHER UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1810 Apr-Chr5 21384325 21388089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1810 K14016 - gmx:100795133 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1810 5 21384325 21388089 Apr5g1810 5 21384325 21388089 ECH