Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1806 ATGGCCTCTGCTTCCGCTACTCTGCTTAAGTCATCCCCTGTTCTTGACAAGTCTGAATGGGTGAAAGGCCAAACCCTCCTCCGCCAGCCTTCAGTCTCTGCTGTAAGATGCAATTCCACTGCCACTTCACCCTCACCACTCACCATCAGAGCTGGTTCCTATGCTGACGAGCTCGTCAAAACCGCGAAAACAGTGGCCTCCCCAGGTCGTGGTATTTTGGCTATGGATGAGTCTAATGCTACCTGTGGAAAGCGTTTGGCCTCAATAGGGCTAGAGAACACTGAAGCAAATCGCCAGGCATACAGAACTCTTCTGGTCACTGCTCCTGGTCTTGGTGAATACATCTCTGGTGCAATTCTCTTTGAAGAAACTCTCTACCAATCCACCACTGATGGCCAGAAGATTGTCGATGTCCTTGTTCAGCAGAAGATTGTTCCTGGTATTAAGGTCGATAAGGGTTTGGTGCCTCTAGCTGGTTCCAACGATGAGTCATGGTGCCAAGGTTTGGATGGTCTCGCGTCTCGCTCAGCTGCATACTACCAGCAGGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTTGCAGTCAAGGAAGCTGCTTGGGGTCTAGCACGCTATGCTGCCATTGCACAGGACAATGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGATCATGGCATTGACAGAACATTCGAAGTAGCCCAAAAGGTGTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTGTTCGAGGGTATTCTCCTTAAGCCTAGTATGGTTACTCCAGGAGCAGAGTGCAAGGACAAGGCCACTCCTGGGCAGGTTGCTGACTACACCCTCAAGCTCCTTCACAGGAGAATTCCACCTGCTGTCCCTGGAATCATGTTTCTGTCTGGTGGACAATCTGAGGTTGAAGCAACCTTGAACCTGAATGCCATGAACCAATCTCCTAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCCCTTCAAAACACATGCTTGAAAACCTGGGGAGGGCGTCCAGAGAACGTGAAGGCAGCACAAGATGCACTCCTTTTCCGTGCCAAAGCCAACTCACTCGCTCAGCTTGGCAACTACACTGGTGAGGGTGAATCTGAGGAAGCCACAAAGGGAATGTTCGTCAAAGGATACTCTTACTAA 1206 0.5091 MASASATLLKSSPVLDKSEWVKGQTLLRQPSVSAVRCNSTATSPSPLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGEYISGAILFEETLYQSTTDGQKIVDVLVQQKIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAECKDKATPGQVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKANSLAQLGNYTGEGESEEATKGMFVKGYSY* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1806 401 CDD FBP_aldolase_I_a 55 381 - -
Apr5g1806 401 SUPERFAMILY Aldolase 47 401 - -
Apr5g1806 401 Pfam Fructose-bisphosphate aldolase class-I 57 401 IPR000741 GO:0004332|GO:0006096
Apr5g1806 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 41 401 IPR000741 GO:0004332|GO:0006096
Apr5g1806 401 Gene3D Aldolase class I 39 400 IPR013785 -
Apr5g1806 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 41 401 - -
Apr5g1806 401 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 262 272 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1806 Apr-Chr5 21363216 21365655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1806 54 401 Miscellaneous Gene Families AT3G52930 55.398 1.51e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1806 K01623 - pvy:116130096 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1806 5 21363216 21365655 Apr5g1806 5 21363216 21365655 ECH