Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1802 ATGGCGTTGTTGTGTAAACGCGCGTTTCATTTGTGCTCCAATCATCGCCTCTACCTCCTTTCTTTGTTCCCTTCCACGACGATGCAAAGTTGCAGGCATATTTCGCAGGATGTCAATTCCAACGGAAAGCACGCATTCCTCATCGACACTCTCGCACTCGTAAGGGATTTAGAAGCAAATGGGGTTCCCGCCAAACAGGCCGAGGCTATATCTTCTTCGATAATCGTAGTTATAAATGTTAGTTTGGAAAACGTAGTTCATTCTTTTGTTTCAAAAACAGAAATGCAAAAGTCAGAGGTGCTTCAAGAATCAAATTTGTCGAAGTTCAAGACTGAAGCGCAAAATTCTCAGGAGCATCATTTTTCTTTGTTGCAACGTGAGACTGAAATGCTTCATAATGACATAGACAAGATGAGAAGTGAATTGAGGTATGAGATTGACAAAGTCACTGCTGGGCAGCGTCTGGACTTGAATCTTGAAAGAGGACGCATACGAGATGAGCTTGCTAAACAAAATGCTGAAACCACCAATTTGCTAAACAAACTTGATCGGGAAATCCATGAATTGAGAAGGCAGTTAGAAGCTGCAAAGTATGATGTGTTCAAATACTGTATAGGTACCATTGTCTCCATATGTGTTGTGGGTAAATTGAGGTATTGGTTAACTTTTTTCTTGCCATTTCGTTAA 687 0.409 MALLCKRAFHLCSNHRLYLLSLFPSTTMQSCRHISQDVNSNGKHAFLIDTLALVRDLEANGVPAKQAEAISSSIIVVINVSLENVVHSFVSKTEMQKSEVLQESNLSKFKTEAQNSQEHHFSLLQRETEMLHNDIDKMRSELRYEIDKVTAGQRLDLNLERGRIRDELAKQNAETTNLLNKLDREIHELRRQLEAAKYDVFKYCIGTIVSICVVGKLRYWLTFFLPFR* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1802 228 Coils Coil 165 199 - -
Apr5g1802 228 Gene3D - 49 149 - -
Apr5g1802 228 Pfam Coiled-coil domain-containing protein 90-like 48 215 IPR024461 -
Apr5g1802 228 PANTHER FMP32-LIKE PROTEIN 21 215 - -
Apr5g1802 228 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Apr5g1802 228 PANTHER UNCHARACTERIZED 21 215 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1802 Apr-Chr5 21325175 21330031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1802 - - rcu:8284365 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1802 5 21325175 21330031 Apr5g1802 5 21325175 21330031 ECH