Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1799 ATGAGTCTCATCTCTACGGCCGTTGTTGGTCGACGAAGCTCTACTGAACTAGCTGCTTTAGGCCCTGGCACGGTTTTTTGTGATAACATGAACCTCTTGTTCATGTTCCTTTCCATCGCAACTTCCAATATGGTCGCCACTTCACTTGCAAAAGAGGACAAAAATGAGGTGCAGCATCAAATATCTATGTTACTTTTTATTGGCCTCATATGTGGGACACTGATGCTGTTGTTTACACAGTTTCTTGGTTCGTGGGCGTTAACTGCTTTTACTGGGCCAAAGAATGTGCATATTGTACCAGTAGCAAGCAAATATGTTCAGATTCGTGGCTTGGCATGGCCTGCTGTTCTTTACGGACTGGTTGCTCAAAGTGCAAGTCTTGGAATGAAAGATTCGTGGGGACCTCTAAAGGCTTTGGTCATTGCCAGTGCTGTGAATGCCATTGGTCATGTAATCCTATGCAGTTTTCTGCGATACGGTATAGAGGGCGCAGCATGGGCAACAATGGCATCCCAAATTGTAGCGGCTTTTATGATGATTGAAGCACTGAACAGAAAAGGATATAATGCTTTTGGCTTCTCATTGCCATCGTTCTCTGACTTCTTGCAAATATTTGAGATAGCTGCACCTGTGTTTGTGACGATGTTCTCAAAGGTGGCTTTCTATTCTCTTCTTACATATTTTGCCACAGCTATCGGTACTCATACAGTTGCAGCTCATCAGGTTATGATTCAGATGTACAGCATGTGCGTAGTATGGGGGGAACCTCTTTCTCAAACTGCTCAATCATTTATGCCCGAGCTATTATATGGGTTCAATCGAAGTTTGGAGAAGGCACGAACCCTATTGAAGTCACTGGTGATTATTGGAGCATTGCTTGGACTAGTAATTGGACTTGGCGGAATGTCTATTCCTTGGTTGTTGCCAAACATTTTTACCCCTGATCTTAAGGTCGTACGTGAGATGCGCAGCGTGTTGATTCTGTTCTTTTTTGCTTTATGTGTGTCACCCTGTACTCACAGCCTCGAGGGCACATTACTGGCTGGCGGGGACCTTAAATTTATTAGCTTATCAATGAGTGGATGCTTCTCCCTCGGAGCTGTTTTACTATTGCTTGTGAGTAGTAAAGGCTATGGTTTGCCTGGTTGTTGGTGTGCTCTAGTAGGATTTCAATGGGCTCGATTCTTCCTTGCTCTCCGGCGCCTTCTCTCTCCTAATGGCATGCTTTACTCTGAGGAAAGCCAATTTGAACTTGAAAAGTTGAAAGCAGCTTAG 1275 0.4431 MSLISTAVVGRRSSTELAALGPGTVFCDNMNLLFMFLSIATSNMVATSLAKEDKNEVQHQISMLLFIGLICGTLMLLFTQFLGSWALTAFTGPKNVHIVPVASKYVQIRGLAWPAVLYGLVAQSASLGMKDSWGPLKALVIASAVNAIGHVILCSFLRYGIEGAAWATMASQIVAAFMMIEALNRKGYNAFGFSLPSFSDFLQIFEIAAPVFVTMFSKVAFYSLLTYFATAIGTHTVAAHQVMIQMYSMCVVWGEPLSQTAQSFMPELLYGFNRSLEKARTLLKSLVIIGALLGLVIGLGGMSIPWLLPNIFTPDLKVVREMRSVLILFFFALCVSPCTHSLEGTLLAGGDLKFISLSMSGCFSLGAVLLLLVSSKGYGLPGCWCALVGFQWARFFLALRRLLSPNGMLYSEESQFELEKLKAA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1799 424 PANTHER PROTEIN DETOXIFICATION 1 414 - -
Apr5g1799 424 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 1 414 IPR044644 -
Apr5g1799 424 Pfam MatE 1 149 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g1799 424 Pfam MatE 210 369 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr5g1799 424 TIGRFAM matE: MATE efflux family protein 1 384 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1799 Apr-Chr5 21297256 21301875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1799 K03327 - ccaj:109803055 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1799 5 21297256 21301875 Apr5g1799 5 21297256 21301875 ECH