Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1798 ATGGCTTCTTCCTCGCGAGCAAGGAGTAGTTCACCGTTTTCTTACCGTAAATCCTCGACTCCGTACTCATCCACTTCTTCGTCTTCTTCCTTCATGAGCGGAAGGTTAATGCCCCGATCCTGCTCTTCCTCTACGTCGTCGTTTTTCAACTCCGGTGGCCGATCCATGACTCCGAGTCGCGGTTGCAGCGAGTCAACGTATCAAGGTTCGCGCGGTTACGGTGGTCGTTCCCCGGTGGCGTTCGGGACGGAGGAGCTGATTGCGGAGCCTGTGGATTCGTCGAGGTCTGGCGATAGCATTTCGGTCACGATTCGGTTTAGGCCGTTGAGTGAAAGGGAGTATCAGAGAGGGGATGAGATCGCGTGGTATGCGGATGGTGACAAGATTGTCAGAAATGAGTATAATCCAGCTACTGCTTATGCATTTGATAGAGTATTTGGACCACATACCAATTCTGAAGAAGTGTATGAAGTAGCAGCCAAACCTGTAGTGAAGGCTGCCATGGAGGGCATCAATGGAACTGTGTTTGCCTATGGTGTGACGAGTAGTGGTAAGACACATACTATGCATGGTGATCAAAATTCTCCTGGTATCATACCCCTGGCTATAAAGGATGTTTTCAGTATGATCCAAGATACTCCAGGAAGAGAATTCTTACTCCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGACTTACTTGATCCAACTGGCCAAAATTTGCGAGTTAGAGAAGATGCACAGGGAACTTATGTGGAGGGTATTAAGGAAGAAGTTGTTTTATCTCCTGGACATGCACTTTCTTTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAATCTCTTTAGCAGCCGGAGTCACACAATATTTACACTGATGATAGAAAGCAGTGCTCATGGTGATGATTATGATGGAGTGATCTTCTCTCAACTTAACTTGATTGATTTGGCTGGATCTGAGAGCTCAAAAACTGAGACAACTGGGTTAAGAAGAAAAGAAGGATCTTACATCAACAAAAGTCTTCTGACACTTGGAACTGTTATAGGAAAATTGAGCGAGGGGAAGGCATCTCATGTTCCATATCGAGATTCAAAGCTAACCCGCCTGCTGCAATCTTCTCTTAGTGGCCATGGCCATGTTTCTCTTATATGCACAGTAACTCCAGCATCCAGTAACATGGAGGAGACTCATAATACCTTGAAGTTTGCCAGCAGGGCAAAACGAGTTGAAATATATGCATCACGTAATAAGATTATTGATGAAAAATCTCTGATTAAGAAATATCAGAGAGAAATTTCAGTCCTCAAACTAGAACTTGATCAACTAAAGAAGGGGATGGTAGTTGGTGTCAATCATGAGGAAATTTTGACCTTAAAGCAAAAGTTGGAAGAAGGTCAGGTAAAAATGCAATCAAGATTGGAAGAAGAGGAGGAAGCCAAGGCTGCTCTTCTGAGTAGGATCCAGAGGCTAACCAAACTAATTCTGGTTTCCTCAAAGAATGCAATTCCTGGATATCTAACTGATATTCCCAGCCACCAACGAAGTCACTCTGTTGGCGAGGATGATAAATTTGATGCCCTTCGTGATGGTGGTCTAATTGAAAATGAGAGTGAGAAGGATGCTTCTGCAGCGTCATCAGATTTGTTTCCCGATGTTAGACATAAAAGATCATCAAGTAGATGGAATGAAGAGCTCTCCCCAGCTAGCAGTACTGTTACTGAATCAACACAAGCTGGTGAACTGATCAGCAGAACAAAACTGACAGCGGGTGGGATGACAACGTCCGATCAAAAGGATCTTCTTGTTGAACAAGTCAAAATGCTAGCTGGAGATATTGCTTTCAGTACCAGCACTCTGAAGCGCTTGATGGAGCAATCTGTAAATGACCCTGAAGGCTCCAAAAGTCAGATTGAGAACTTGGAACGGGAGATCCAAGAAAAAAGGAAGCAAATGAGGATGCTAGAACAAAGATTAATTGAGACTGGTGAATCTCCGATGGCTAATTCATCACTAGTGGAAATGCAACAGACAGTCACAAGGTTAATGACTCAATGTAATGAAAAGGCCTTTGAGTTGGAGATAAAATCCGCAGACAATCGTGTCCTTCAGGAACAGCTAAATGATAAGTGTTCTGAAAACAGAGAGTTACAAGAAAAGGTGAAGCAGCTAGAGCAGCAACTGGCAACAGTTAGTAGTGGGACATTGTTAGTTTCTTCTGATCAGAGTGCGTCAGGAGAACACATTGATGGGCTGAAAAAGAAAATACAATCCCAGGAAATTGAAAATGAAAAACTGAAGCTTGAGCAAGTTCACTTGTCAGAGGAGAATAGTGGGTTGCGAGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCGTCTGCTGCTGCTGTGGAACTGAAAAATTTGGCTGGGGAAGTGACAAAACTTTCATTGCAGAATGCAAAGATGGAAAAAGAATTGATGGCTGCACGAGATCAGGCCAACTCTCGTAGTGGTGTGCAAACGGTTAATGGTGTCAACCGCAAGTACATTGATGCAAGATCTGGAAGGAAGGGGAGGATCTCTAGTCGTGCTAATGAAATTTCTGGAGCTGGTCTAGATGATTTTGAGTCATGGAGTCTTGATGCTGATGATTTGAAAATGGAATTACAAGCTCGGAAACAACGAGAGGCAGCTCTTGAGGCTGCATTAGCCGAGAAGGAATTTGTGGAAGAGGAGTACAGGAAAAAGGCTGAAGAGGCCAAGAAAAGAGAAGAAGCCTTGGAGAACGATTTAGCAAATATGTGGGTCCTTGTTGCTAAGTTAAAAAAAGAAGGCGGTGCTGTCCCAGAATCAAACATTGATAAAAAAAATGATGGGGCAGAGCAAATAAATGATAAAAAAACCAATGACATTGAAAGTAATATTGTCTCCAAGGAGCAGCTTTTGGATGTATCAAAACCAGACGACGAAATTCCTAAAGAAGAGCCCTTGGTTGTTCGCCTCAAGGCACGCATGCAAGAAATGAAGGAAAAAGAACTCAAGTATCTTGGCAATGGCGACGCCAATTCCCATGTTTGTAAAGTATGTTTTGAGTCTCCCACTGCAGCAATTCTTCTTCCATGCCGACATTTTTGTTTGTGTAAATCTTGTTCCCTTGCTTGTTCTGAGTGTCCAATATGCCGCACAAATATTACAGATAGGCTTTTTGCTTTTACATAA 3237 0.4294 MASSSRARSSSPFSYRKSSTPYSSTSSSSSFMSGRLMPRSCSSSTSSFFNSGGRSMTPSRGCSESTYQGSRGYGGRSPVAFGTEELIAEPVDSSRSGDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEYNPATAYAFDRVFGPHTNSEEVYEVAAKPVVKAAMEGINGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSMIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGDDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKASHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKLELDQLKKGMVVGVNHEEILTLKQKLEEGQVKMQSRLEEEEEAKAALLSRIQRLTKLILVSSKNAIPGYLTDIPSHQRSHSVGEDDKFDALRDGGLIENESEKDASAASSDLFPDVRHKRSSSRWNEELSPASSTVTESTQAGELISRTKLTAGGMTTSDQKDLLVEQVKMLAGDIAFSTSTLKRLMEQSVNDPEGSKSQIENLEREIQEKRKQMRMLEQRLIETGESPMANSSLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNDKCSENRELQEKVKQLEQQLATVSSGTLLVSSDQSASGEHIDGLKKKIQSQEIENEKLKLEQVHLSEENSGLRVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKMEKELMAARDQANSRSGVQTVNGVNRKYIDARSGRKGRISSRANEISGAGLDDFESWSLDADDLKMELQARKQREAALEAALAEKEFVEEEYRKKAEEAKKREEALENDLANMWVLVAKLKKEGGAVPESNIDKKNDGAEQINDKKTNDIESNIVSKEQLLDVSKPDDEIPKEEPLVVRLKARMQEMKEKELKYLGNGDANSHVCKVCFESPTAAILLPCRHFCLCKSCSLACSECPICRTNITDRLFAFT* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1798 1078 Coils Coil 466 500 - -
Apr5g1798 1078 MobiDBLite consensus disorder prediction 1 72 - -
Apr5g1798 1078 Coils Coil 644 664 - -
Apr5g1798 1078 Coils Coil 706 740 - -
Apr5g1798 1078 Pfam Zinc finger, C3HC4 type (RING finger) 1030 1072 - -
Apr5g1798 1078 Coils Coil 811 838 - -
Apr5g1798 1078 Coils Coil 755 782 - -
Apr5g1798 1078 SUPERFAMILY RING/U-box 1031 1072 - -
Apr5g1798 1078 ProSiteProfiles Kinesin motor domain profile. 99 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 MobiDBLite consensus disorder prediction 955 975 - -
Apr5g1798 1078 ProSitePatterns Kinesin motor domain signature. 316 327 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr5g1798 1078 MobiDBLite consensus disorder prediction 541 586 - -
Apr5g1798 1078 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 58 1040 - -
Apr5g1798 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 451 IPR027417 -
Apr5g1798 1078 MobiDBLite consensus disorder prediction 569 586 - -
Apr5g1798 1078 MobiDBLite consensus disorder prediction 1 75 - -
Apr5g1798 1078 SMART kinesin_4 97 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 Pfam Kinesin motor domain 105 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 PANTHER CENTROMERE PROTEIN E 58 1040 - -
Apr5g1798 1078 CDD KISc_CENP_E 99 416 - -
Apr5g1798 1078 ProSiteProfiles Zinc finger RING-type profile. 1032 1067 IPR001841 -
Apr5g1798 1078 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1006 1076 IPR013083 -
Apr5g1798 1078 Coils Coil 888 940 - -
Apr5g1798 1078 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 PRINTS Kinesin heavy chain signature 317 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1798 1078 Coils Coil 432 452 - -
Apr5g1798 1078 Gene3D Kinesin motor domain 90 446 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1798 Apr-Chr5 21279369 21290955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1798 35 1077 Miscellaneous Gene Families AT4G39050 72.899 0.0 1507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1798 K11498 - gmx:100812720 1793.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1798 5 21279369 21290955 Apr5g1798 5 21279369 21290955 ECH