Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1678 ATGACAAACTCTAGGTGGCTAACGCCCTTGCGAAGAACGGGTAGATCAAGGAAAGAACGCGAAGAAGGTAGCTTATGTGGCACGCCAAACGTGAATGGAGAATACCTTGAAGCATTCAGAACGAAATCATACGTTGAAATATGCAACAAAGCACACGGGCAGCTAAGAAATCCAAGCACAAGACCACTCTCTCCCACACCTTCTTTCATGCACCTCACTGAATATTTGCTAGAACCTCGGCAAGAAATTATAACTAACATGAAGTTGCACCCTCTTCTGGTGGACTACTTTGAGGCCAGCTTAGAAGCATGCCGTTGTTGCGACACAATCCTTCAAGCCATCCATCAAACTCGATGTTCTTATGCAAGAGTCGCCACTTTTGTCAAGGACCAATCCCAAAAGGCCAATTGCACCGGACTTTCTTCCTTCGTAATACAAAGTAACCCTTTGTCCATTATTATGTTCCGTGACATTCACGATAGATACATGATCCTCCTTCGTAGATTAATGTCAAAGAGAACGAAAATTCGAAGAATGTTGGCAATAAAGCGAGTTTGCATGAAGGTTGGAGGAATTGGATTAGTGATTGCACAAAGCGCTCTTGTGGTGGCTTTATTGGTGTTTGCGTTTCATAGCACAATTGGGTTAGCGGTTGCACCTTGTGTAGTGGGTAGTCTAAGCCTATTTGGTTTGGTAAGGAAGAGATTTAAGGGGATTCATGAGAGGCTTAACAATAACACAAGCTCTTCTAGAAGATTGTGTGAGCAACTTGATGTTGCAGCCAAAGGGGTTTATATATTGATCAATGACTTGGATACTATGAGCCGTATGGTTAAGAGATTAGACGATGAGGTTGAACACTGGAGAGAGGTTGCTGATATATGTTTGAAGACCAATGGCAAGTGTGAAACATTGAAGAGGGTCGTCAAGGAGTTTGATGATAATCAATATAACTTTTTGGATATGTTGGAAGAGCTTGAAGAGCATGTTTACTTGTGTTTTCTTACTGTGAACAGATCTAGAAGGCTACTTATGCAAGAAATTACGGAGACACAATGTTAA 1062 0.4181 MTNSRWLTPLRRTGRSRKEREEGSLCGTPNVNGEYLEAFRTKSYVEICNKAHGQLRNPSTRPLSPTPSFMHLTEYLLEPRQEIITNMKLHPLLVDYFEASLEACRCCDTILQAIHQTRCSYARVATFVKDQSQKANCTGLSSFVIQSNPLSIIMFRDIHDRYMILLRRLMSKRTKIRRMLAIKRVCMKVGGIGLVIAQSALVVALLVFAFHSTIGLAVAPCVVGSLSLFGLVRKRFKGIHERLNNNTSSSRRLCEQLDVAAKGVYILINDLDTMSRMVKRLDDEVEHWREVADICLKTNGKCETLKRVVKEFDDNQYNFLDMLEELEEHVYLCFLTVNRSRRLLMQEITETQC* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1678 353 MobiDBLite consensus disorder prediction 1 25 - -
Apr5g1678 353 Pfam Protein of unknown function (DUF677) 73 348 IPR007749 -
Apr5g1678 353 PANTHER UPF0496 PROTEIN 2-RELATED 15 351 - -
Apr5g1678 353 PANTHER UPF0496 PROTEIN 3-RELATED 15 351 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1678 Apr-Chr5 20338922 20340359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1678 - - gmx:100819660 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1678 5 20338922 20340359 Apr5g1678 5 20338922 20340359 ECH