Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1660 ATGGGAGCGGTTTGTTCTGCTGGGATGGTGGAGAAGAATGCAGAGCTTGGAGGGAAGAGTTTGGGGTTTTCTGGGAAGCTTAAGAAGGAAAATAGCTTTATGAATCGGAGAGATAGTAATAATGGTCAAGGCAAAAAACAAATGAAGCACGAAACTCGTTTTTCCACTGAACTTGGTTTATCGACTCCTGCTTCAATGGGGGGAAAACAGGTCTCTCAGAAGGGTTCTTTTCTGGGAAAAGCTGGCGAGAGGGCAGTGGAAGTTCTTGACACACTTGGAAGTGGGATGTCAAAGTTAAACACGAGTACTGGGTTTGTCTCTGTAACGGCTTCTAGAGGGAATAAAATATCAATATTGGCATTTGAAGTAGCTAATACAATAACCAAAGGAGCAAGTTTGTTTCAATCACTTTCTGAAGAAAACATTCAGCTTCTTAAAAAGGAAATTTTACAATCTGAAGGGGTTCAACAATTAGTCTCCACTGAGACCAAGGAGTTATTAAGTCTTGCAGAGGCTGACAAAAGGGAAGAATTCAATGCCTTTGCACGGGAAGTAGCTAGATTTGGAAATATGTGTAAAGACCCACAGTGGCATAACCTAGATCGATATTTCTCAAGATTACACTTGGATGTCCTGGGTGACAAACAATATCGGGTAGAGGCAGAGAAGACAATGCAGGAGTTTACCAATCTAGTTCAACATACTGCTGAATTATACCATGAATTAAGTGCTTATGAACGTTTTGAACAAGATTATCTGCATAAGATTAAGGAAATGGAGTCCTTAAATCTTCCTCTAAAAGGGGAGAGTATCACGATTTTTCAAAGTGAGCTAAAGCATCAGAGAAAGCTTGTGAGGAGCTTGAAAAAGAAGTCTCTTTGGTCCAGAAGTTTGGAGGAGATTGTTGAAAAGCTTGTTGATATTGTTACCTATATGCATCAAGCAATTTATGAGCTCCTTGGAAATCATGGTAAAACTGCTACCGAGTACAGTCAAGGTTCCCAAAGAATAGGTGAAGCTGGTCTTGCACTACACTATGCTAACATCATTAACCAGATAAATATGATTGTAAGTTTGTATCATGCATCCATGCTAGTAAGATTTGCAATGACCTTACCAAATAATTATTTTCGTTTAAATAACAATGGGTTACTTTGTCTCAATCAGGCATCTCGCCCAACCTCTCTTCCTACAAATACACGGGACACATTATATCACAGTTTGCCTAACAGTGTTAAGAGTGCTCTTCCATCCCGGTTGCAAACCATTGCTGACATGAAAGAGCTATCCATCACACAACTCAAAGCGGAAATGGATAAGACTCTTCAGTGGCTTTTACCATTTGCCACAAATACAATCAAAGCACATCAAGGTTTTGGATGGGTTGGTGAATGGGCAAACACAAGTAACGACTTAGGTGACAACACAGCCAAAGAAAGTAACCCGATTCGCATCCAGACACTTTATTATGCTGATAAGCAGAAGATAGATCTTCACATTATTGAATTGTTGGCATGGCTTCACCATTTGGTTAGCTCTGTAAGGTCAAGACAAAATGCCTTGAGGCCAATGCCTTCATGGTCTCCTCCAAAGGGACTTGAACTTCAGTCCAAGATGCGACAGTTTTTAATTCTATCTGTGGAAAATAACAAGAAGCCGTTGGGAACTCTTTCTCAAGAGGATAGGAGGTTGTTGGAAGAGGTCATTGCAAGAAGAAGGAACCCAGGAATTAGCAAGAGCGAGGATCTTGGTTTGGCCAAGAAAAGAGAAGCCAGGGAATTGCATGGGACCAAAAGTGCTGGGAGTTCACCTGCTAAGGAGTTCTTCAGTTCAAGACACGTTTTTAACCACCAAAACTACAACGTTTGGGATATAATGGATGGGTTAAGATAA 1893 0.4068 MGAVCSAGMVEKNAELGGKSLGFSGKLKKENSFMNRRDSNNGQGKKQMKHETRFSTELGLSTPASMGGKQVSQKGSFLGKAGERAVEVLDTLGSGMSKLNTSTGFVSVTASRGNKISILAFEVANTITKGASLFQSLSEENIQLLKKEILQSEGVQQLVSTETKELLSLAEADKREEFNAFAREVARFGNMCKDPQWHNLDRYFSRLHLDVLGDKQYRVEAEKTMQEFTNLVQHTAELYHELSAYERFEQDYLHKIKEMESLNLPLKGESITIFQSELKHQRKLVRSLKKKSLWSRSLEEIVEKLVDIVTYMHQAIYELLGNHGKTATEYSQGSQRIGEAGLALHYANIINQINMIVSLYHASMLVRFAMTLPNNYFRLNNNGLLCLNQASRPTSLPTNTRDTLYHSLPNSVKSALPSRLQTIADMKELSITQLKAEMDKTLQWLLPFATNTIKAHQGFGWVGEWANTSNDLGDNTAKESNPIRIQTLYYADKQKIDLHIIELLAWLHHLVSSVRSRQNALRPMPSWSPPKGLELQSKMRQFLILSVENNKKPLGTLSQEDRRLLEEVIARRRNPGISKSEDLGLAKKREARELHGTKSAGSSPAKEFFSSRHVFNHQNYNVWDIMDGLR* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1660 630 Pfam Domain of unknown function (DUF3475) 118 174 IPR021864 GO:0045927
Apr5g1660 630 Pfam Protein of unknown function (DUF668) 336 454 IPR007700 GO:0045927
Apr5g1660 630 PANTHER OS01G0873900 PROTEIN 1 358 IPR045021 GO:0045927
Apr5g1660 630 PANTHER OS01G0873900 PROTEIN 390 629 IPR045021 GO:0045927
Apr5g1660 630 PANTHER DUF668 FAMILY PROTEIN 390 629 - -
Apr5g1660 630 PANTHER DUF668 FAMILY PROTEIN 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1660 Apr-Chr5 20202879 20207465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1660 - - aprc:113864981 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1660 5 20202879 20207465 Apr5g1660 5 20202879 20207465 ECH