Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1648 ATGGCTCTTAGAAAATCAAGTAAACTTCCTCAAACAGCACTTATTAAGCAAATCCTAAAGAGATGCTCAAGCTTAGGGAGAAAACAAGGGTACGACGATCAAGGCCTTCGTTTGGACGTACCTAAGGGTCACTTTGTTGTATATGTTGGAGAAAATAGAAGTAGATACATTGTTCCAATATCTTTTCTAAGTCGCCCAGAGTTCCAAACACTTCTTCATCAAGCAGAAGAAGAGTTTGGCTTTGATCACGAAAGGGGTCTCACAATTCCATGTGAAGAAGATGTTTTTGAGTCTCTCACTTCCACCCTCAGATGA 315 0.4032 MALRKSSKLPQTALIKQILKRCSSLGRKQGYDDQGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHERGLTIPCEEDVFESLTSTLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1648 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Apr5g1648 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
Apr5g1648 104 Pfam Auxin responsive protein 32 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1648 Apr-Chr5 20105836 20106150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1648 39 99 Calmodulin-binding Proteins AT3G43120 55.738 2.15e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1648 K14488 - gmx:100305700 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1648 5 20105836 20106150 Apr3g0336 3 6732842 6733300 ECH
Apr5g1648 5 20105836 20106150 Apr7g1090 7 17877635 17877949 ECH
Apr5g1648 5 20105836 20106150 Apr5g1648 5 20105836 20106150 ECH