Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1644 ATGGGTTCCGTTTCTCTGAAAATAGGGGATGGAACTGCTAGATTCAAAAGAGCAACCGTGTGTTCTTCCGCAGTTAACATTCTCATGATCTTCTCTGTCATCACCACCAATCTCTTTGCCCTCTATGCTTTCTCTTCTTCCCCGAAAGACCATTCTCTTCACCCTTCCCACAAAAACTTCTCTCTCATCTCCGAGCAGGTTACTCTCATTCTCAGAGAGATCGATTTGTCTCAGAAGAAACTTGCCCAGATAGAAAAAGAGCTTCTTGGCTACGAAAGCATCGATCTTTCCAGACCCAACATTGCAACTGAACTCAAACTCTTTCTCCACCGTCACCAGCTCCCACTGGGCAAAGACTCCAAAACTGGAATCACCGAAATGGTGTCATCCGTTGGCCATTCATGCGAGAAATCTTCGGACTTGTTGTCTCAGTACATGAGTTACAAGATTTCTGGACCCTGCCCTGATGATTGGAGTGTGGCACAAAAGCTGATTCTGCGAGGGTGTGAGCCTTTGCCTAGAAGGAGGTGTTTTGCTAAGTCTGTTTCTAAGGTTGGTCTTTATTCTTTTCCCACTTCACTTTGGAAACCCGTTGGTAACAAAACTGTTAACTGGAGTGATCTCGGTTGCAAGAGTTTTGAATGTTTGAATGGCAAGAGGTTGAGTAGAGATTGCATAGGTTGCTTTGATTTGGTTAATGGGTATGAGAATCAGAGATTTTTCAAGTCTAGGAGTAAGAATGATTTTCTCGTTGATGATGTGTTGGCATTGGGAAGTGGTGGGATTAGGATAGGACTTGATGTTGGAGGTGGTTCTGGCTCCTTTGCAGCTACAATGGCTGAAAGAAATGTTACTGTTGTTACTAGCACTCTGAATGTTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGGGCTTTTCCCTGTTTTCTTAAGCTTAGATCATAGATTACCTTTCTATGACAATGTGTTTGATTTGGTTCGTGCTGCGAGTAGCTTGGATGTTGGAGGGAAGGCAGAGAAGTTGGAGTTTTTGATGTTTGACATTGATCGTGTTTTGCGGGCTGGTGGTTTGTTTTGGCTGGACAACTTCTATTGTGCCAATGAAGAGAAGAAAAAGGCATTGACTAGGTTGATTGAACAGTTTGGATACAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTCTTGGATCAGCCAAATCTCAAGTTGTTTTGTCTGCTGTTCTTCAGAAGCCTGTAAGGGTGTAA 1254 0.4338 MGSVSLKIGDGTARFKRATVCSSAVNILMIFSVITTNLFALYAFSSSPKDHSLHPSHKNFSLISEQVTLILREIDLSQKKLAQIEKELLGYESIDLSRPNIATELKLFLHRHQLPLGKDSKTGITEMVSSVGHSCEKSSDLLSQYMSYKISGPCPDDWSVAQKLILRGCEPLPRRRCFAKSVSKVGLYSFPTSLWKPVGNKTVNWSDLGCKSFECLNGKRLSRDCIGCFDLVNGYENQRFFKSRSKNDFLVDDVLALGSGGIRIGLDVGGGSGSFAATMAERNVTVVTSTLNVDAPFSEFIAARGLFPVFLSLDHRLPFYDNVFDLVRAASSLDVGGKAEKLEFLMFDIDRVLRAGGLFWLDNFYCANEEKKKALTRLIEQFGYKKLKWVVGEKVDSLGSAKSQVVLSAVLQKPVRV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1644 417 Gene3D Vaccinia Virus protein VP39 232 406 IPR029063 -
Apr5g1644 417 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 417 - -
Apr5g1644 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 239 386 IPR029063 -
Apr5g1644 417 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 259 386 IPR004159 GO:0008168
Apr5g1644 417 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1644 Apr-Chr5 20065737 20067083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1644 - - gmx:100798510 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1644 5 20065737 20067083 Apr5g1644 5 20065737 20067083 ECH