Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1629 ATGGGAGCTCTGGCTACACTCGCCCCTTGGACTCCCGAAGATGATCTTTTGCTCAAAAACGCCGTTGAGGCTGGTGCTTCCTTAGAGTCACTCGCGAAAGGAGCAGTGCAGTTTTCTCGAAGATATGGTATTAGAGAAATACAAGATCGATGGTATTCTCTCCTCTATGATCCTGTAATTTCTGCTGAGGCTTCTGCTTGCATGACGAACTTTGAGCTTTCTGCATCGCCTCTTCCGTCGAGGTTATTTAAGTTTGGACCTTTAAAAGAGAGTAAAGTTGTTTCTGTTAAGAGAAAATCTGGAAGTGTTCGCGCTTTGTATTATGCTATGCACAAAAGAATCCGCAATAGCTCATTAGGTTCCATGGATATAGGTTTTATAGTTGATCCGGAAAATGGCAATTATATAGTGAATGGAAGTGAGCCTCTATCTGAAAACTGCATGCCAGAAGGTGAAACTTTGAATCATTTTTCAAATCTGGATCCTGCTCGGTATGCTTTTTCTGAAAATATGATGGATGGTAATGTTGCTTCTAATGGAGTTACTGCTCATGCATATAGCACTGGAGTTGACAATCCAGTTGAAGAGAATTTCCCTGTTGAGCAAAATTGTATACTTAAGGAAGAACCTCAAATTCTTGGAGATAATATGTCTTTGAATGGAGTGGCTGAGGACTTGGGTGTTCCAAAAGATTTGGGTATAGATGAGTGGATTGGAGATGATAATTTAGAGAAAATGCCCTTGTCTGCATTGGATCATATCAACAATGACCCTGGAAATTTGTGTTCTGAGTTTGATGACAACAATGTATTTGATTCACCTGAGCTAGAGTGTGGAACATCGTTTAACTTATCTCCACTTCCTGAAATGCCAATCTGGAGAACAGATGACAGCATTCAAGAGTCTGATATTCCATGTGATGGTTTTAAAGACTCTATTCCTTGTGGGGAGGCCTATTTGGAAGAACTGTCCAATTCTCTCTTCAACTTCAGTAGTGAGGAAGAACTCTTTCTGATGGATGTTGATGGAAAAGATGGGATTGACAAGTCTTACTATGATGGTCTGAGTTCACTTCTACTAAATACTCCGAATGATGCTAATCAAGATCAGATACCTAAAACGGATGAAAGAGAATCTTTAATGGCCTCTCAGGCACATGCTACAGATCTGCCAGCTTCATGTCACGCAGAAGTAGATGACAACCCAGGGTCAGGCTCTAGTGGTGTTCAACTAGATCACAAATTAGAATTGCCCAAGCCATCTTCTGCCTTGGGGAAAGACCCTCAATTTCCCGAATATGTTAATGGAATTATTTACTGTACATTAAACACCGAGGACCCAGAAGTTCCATCCAATGATGATGTCTTCCTACCATTTGATGTGCCTCCTTCCATATTTCCCTCTTCATCTAATTCAACTTTTAAAGAATCCACCAGTGAAAGAGGTAAAATTTTGATGCATGTAGAAAAGAAAAACCTTGTAGAATCTCATGCATCCCCTCAAATGACGGGATCTGCTCACTTCTCAGGACCTGTTGCTGGTTCTAAGGTAAACTGTGATTTGCCTGCTAGTCATACATCACACACAGGGTCTAGGAGTGCAGTTACTGTTGTTGGTGGCTTGGGTGTAAATAATGCAGCAAACACAACCAATGCTCTTCTGCATTCAAATCAAAAAGAAGAAGCTACCAATGCTGACCTGGCAAAGCATCTAAACAATCGTGTGACAAATCCTTTCATTAAGAAAGCAGTTGTTGGTTCTAATGACTTCAGAGATCATCCCCAATCCAATGGTTCTGGCATGAAGAAGGACCAAGATTTAGCCTTACCACTTCAAGACCACCAGTTGCCACATGCTGAAGTGGGGTCCTTGGATGTTCTTGGGTCAGAGCTGGTGGTAAATCCCCAAACTTTAAATGAGGAACAACAATATATAGAGAGTGACGATGAAATTCCTTCTTATTCTGATGTAGAGGCAATGGTACTTGATATGGACTTAGATCCTGATGATCATCAAGATTTGTCTTATAATGAGGAAGTATCAAAATATCAACATGTGGAAAGTAAGCGAGCAATCATGAGGCTGGAACAGGGTGCCCATTCTTGTATTCAGAGAGCCATTAATTCACATGGAGCATTTGCCATTTTATATGGTCGCCACTCGAAGCATTATATTAGGAAACCCGAGGTTTTACTTGGACGAGCGACAGAAGGTGTTCCTGTGGATATTGACTTGGGCAAAGGAGGGTATGGCAATGCAATATCTCGACGTCAGGCAATTATAAAGATGGATAAAGATGGATCATTCTACATCAAAAACTTTGGCAAGAGTTCAATCCTGGTAAATAGCAAAGAAGTTCACACTGGTCAATCTCAAAGATTGCATTCCAATTATCTGATTGAGGTGAGAAGCATGCCGTTGATATTTGAGATAAATCGAAGTCGAGTGAAGCAGTACCTGGAACATATTTCTGACAATTCACAGACCTTATAG 2493 0.4083 MGALATLAPWTPEDDLLLKNAVEAGASLESLAKGAVQFSRRYGIREIQDRWYSLLYDPVISAEASACMTNFELSASPLPSRLFKFGPLKESKVVSVKRKSGSVRALYYAMHKRIRNSSLGSMDIGFIVDPENGNYIVNGSEPLSENCMPEGETLNHFSNLDPARYAFSENMMDGNVASNGVTAHAYSTGVDNPVEENFPVEQNCILKEEPQILGDNMSLNGVAEDLGVPKDLGIDEWIGDDNLEKMPLSALDHINNDPGNLCSEFDDNNVFDSPELECGTSFNLSPLPEMPIWRTDDSIQESDIPCDGFKDSIPCGEAYLEELSNSLFNFSSEEELFLMDVDGKDGIDKSYYDGLSSLLLNTPNDANQDQIPKTDERESLMASQAHATDLPASCHAEVDDNPGSGSSGVQLDHKLELPKPSSALGKDPQFPEYVNGIIYCTLNTEDPEVPSNDDVFLPFDVPPSIFPSSSNSTFKESTSERGKILMHVEKKNLVESHASPQMTGSAHFSGPVAGSKVNCDLPASHTSHTGSRSAVTVVGGLGVNNAANTTNALLHSNQKEEATNADLAKHLNNRVTNPFIKKAVVGSNDFRDHPQSNGSGMKKDQDLALPLQDHQLPHAEVGSLDVLGSELVVNPQTLNEEQQYIESDDEIPSYSDVEAMVLDMDLDPDDHQDLSYNEEVSKYQHVESKRAIMRLEQGAHSCIQRAINSHGAFAILYGRHSKHYIRKPEVLLGRATEGVPVDIDLGKGGYGNAISRRQAIIKMDKDGSFYIKNFGKSSILVNSKEVHTGQSQRLHSNYLIEVRSMPLIFEINRSRVKQYLEHISDNSQTL* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1629 830 PANTHER MICROSPHERULE PROTEIN 1 1 828 IPR037912 GO:0002151|GO:0031011|GO:0071339
Apr5g1629 830 SUPERFAMILY SMAD/FHA domain 716 811 IPR008984 GO:0005515
Apr5g1629 830 ProSiteProfiles Forkhead-associated (FHA) domain profile. 730 786 IPR000253 GO:0005515
Apr5g1629 830 SMART FHA_2 729 786 IPR000253 GO:0005515
Apr5g1629 830 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Apr5g1629 830 PANTHER FHA DOMAIN PROTEIN 1 828 - -
Apr5g1629 830 CDD FHA 726 812 IPR000253 GO:0005515
Apr5g1629 830 Pfam FHA domain 732 801 IPR000253 GO:0005515
Apr5g1629 830 Gene3D - 673 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1629 Apr-Chr5 19931146 19937847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1629 - - aprc:113865691 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1629 5 19931146 19937847 Apr5g1629 5 19931146 19937847 ECH