Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1627 ATGGCGTCGAGATCCGAGATTGAGCTTGTTGTAGACAGAACCACCTCCACCATCATTAGTCACAACAACCGTTTCAATAATCGCGAATCAGCCTCGTTAGTGGTCGCAAAGTGCTCATTAATGTCCCTAAATTCCATACTAACAAAATTTCATGCAGGTTATTTCAGAATAAGTCTCTCCCTAGGTGGCCAAGCTTTATTGTGGAAAACACTAATGGAACCAACGGATGACACAAGCGCTCTTCGACGCGTGTTTCGCACGCTTCCCGCCACAGTTTTCCTAGTACTATGGTCTCTCGCACTATTTATTCTCGTTTCACTGTCTCTTCTTTACCTCTTAAGGTGCTTGCTTTTCTTTAAGATGGTAAAAGCCGAGTTTTTGCACCATGTAGGGGTTAACTATCTCTTCGCTCCTTGGATTTCTTGGCTTCTATTGCTTCAATCGGCACCATTCGTGGCTCCAAAAACCGCCACGTATTTGGTTCTCTGGTGGATATTTGCGGTGCCGGTGGTAGTGCTGGACGTGAAAATTTATGGGCAATGGCTCACGAAAGGGAAGAGGTTTTTATCGAGTGTGGCGAACCCCACGAGCCAGATGTCGGTGATAGGGAACTTGGTAGGGGCACAAGCTGCGGCTCAAATGGGTTGGAAAGAGAGTGCTGTTTGTTTGTTTTCATTGGGAATGGTGCATTACTTGGTGTTGTTTGTGACGCTTTATCAGCGGTTATCGGGTGGAGATGGCCTTCCAGTGTTGTTGAGGCCAGTTTTCTTCTTGTTCTTTGCTGCACCCAGCGTAGCTAGCATGGCTTGGGAATCCATTGTTGGAACCTTTGATACCACTTCCAAAATGCTCTTCTTTCTATCTTTGTTCCTCTTTGCGTCACTGGTTTGCAGGCCAGCACTGTTCAAGAGATCTATGAGAAGGTTCAACGTTGCTTGGTGGGCTTATTCCTTTCCAGTCACAGTGCTTGCTATGGCTTCCACAGACTATGCACAAGAAGTCAAAGGAACTATTTCGCACGTCCTTATGCTCCTCCTGTTATCTCTTTCCGTTCTTGTTTCCCTTGCTCTATCGTTGTTCACTTTGTTCAACTCTAGGATGCTTCTACCGGATAACGATCCTATTGCAAACTTGCTCATTGGTTAA 1146 0.4581 MASRSEIELVVDRTTSTIISHNNRFNNRESASLVVAKCSLMSLNSILTKFHAGYFRISLSLGGQALLWKTLMEPTDDTSALRRVFRTLPATVFLVLWSLALFILVSLSLLYLLRCLLFFKMVKAEFLHHVGVNYLFAPWISWLLLLQSAPFVAPKTATYLVLWWIFAVPVVVLDVKIYGQWLTKGKRFLSSVANPTSQMSVIGNLVGAQAAAQMGWKESAVCLFSLGMVHYLVLFVTLYQRLSGGDGLPVLLRPVFFLFFAAPSVASMAWESIVGTFDTTSKMLFFLSLFLFASLVCRPALFKRSMRRFNVAWWAYSFPVTVLAMASTDYAQEVKGTISHVLMLLLLSLSVLVSLALSLFTLFNSRMLLPDNDPIANLLIG* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1627 381 CDD TDT_SLAC1_like 50 337 - -
Apr5g1627 381 PANTHER OS11G0274300 PROTEIN 5 378 - -
Apr5g1627 381 Gene3D - 44 369 IPR038665 -
Apr5g1627 381 PANTHER - 5 378 IPR030183 GO:0006873|GO:0008308|GO:0016021
Apr5g1627 381 Pfam Voltage-dependent anion channel 49 362 IPR004695 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1627 Apr-Chr5 19915920 19919156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1627 - - gmx:100787036 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1627 5 19915920 19919156 Apr5g1627 5 19915920 19919156 ECH