Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1612 ATGGCGAAGCATTCGGTGGCAATGGCTAAGCAGAGGTGGCCGCTAATGTTGGCGGCATTTTTGTCTATCTCAACAGTGACGGTGCTGTTCATGAGAGCCAACAATTCCGATTCCTGCAACACTAAGCATTTCGTTGGAGCGCAACAGAACCAGATTCGCTCCTCCGTCCAAGTCGGAAATGCAGCTTCCAGTCCCCTAGATTTCATGAAGTCGAAGCTAGTTCTCATGGTTTCGCACGAGCTATCTCTGTCAGGTGGGCCTTTGCTGCTGATGGAGTTGGCGTTTCTGTTGAGGGGCGTTGGTTGCGAAGTTGTTTGGATCACAAATCAGAAACCTGCGGAACCTGATGAGGTCATTTACTGTTTGGAAAGTAAGATGTTGGACCGAGGAGTCCAGGTTCTGCCTTCCAAAGGTGAAAAGGCTGTAGGTACAGCTCTTAAAGCTGATCTGGTCATTCTAAATACTGCGGTAGCTGGAAAGTGGCTGGATGCCGTTCTCAAAGAAAAAGTTTCTTATGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCTATGATTGATTCACATACAACTGCAGAGTACTGGAAGAATAGGACGAGGGAGCGTTTAAGGATTAAAATGCCTGCAACTTATGTTGTACATCTTGGAAATAGCAAGGAGCTTATGGAAGTTGCAGAAGATAATGTTGCAAAGAGGGTTCTTCGTGAGCATGTACGGGAATCTCTTGGAGTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCTCGTGGTAAAGGGCAGGATCTATTTCTTCATTCCTTTTATCAAAGTTTGCAACTCATTCAGGAGAAGAAACTCCAGTTGCCATCTTTGCATGCTGTAATTGTAGGGAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAAATGCGCAAATTTGTTATTGAGAGAAAGATTCAGGACCGTGTTCACTTTGTTAACAAATCCCTGGCTGTGGCTCCTTACCTTGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGGTCGTGGAGAATGTTTTGGAAGGATAACCATTGAAGCTATGGCATTCCGCCTGCCTGTACTGGGCACTGCAGCTGGAGGCACGATGGAGATTGTGGTAAATGAAACAACTGGTTTGCTGCATCCTGTTGGAAAAGAAGGCGTGACACCTCTTGCAAATAACATTGTGAAGCTGGCAACTCATGTTGAGAAGAGGCTGACTATGGGAAAGAAAGGGTATGAGACAGTGAAGGAGAGGTTTATGGAGCACCATATGTCACATAGAATTGCATTGGTTCTAAAGGAAGTTTTACGGAAGGCTAGGTAA 1392 0.4425 MAKHSVAMAKQRWPLMLAAFLSISTVTVLFMRANNSDSCNTKHFVGAQQNQIRSSVQVGNAASSPLDFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGCEVVWITNQKPAEPDEVIYCLESKMLDRGVQVLPSKGEKAVGTALKADLVILNTAVAGKWLDAVLKEKVSYVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLRIKMPATYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLHSFYQSLQLIQEKKLQLPSLHAVIVGSDMNAQTKFEMEMRKFVIERKIQDRVHFVNKSLAVAPYLASIDVLVQNSQGRGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNETTGLLHPVGKEGVTPLANNIVKLATHVEKRLTMGKKGYETVKERFMEHHMSHRIALVLKEVLRKAR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1612 463 Coils Coil 455 463 - -
Apr5g1612 463 Pfam Glycosyl transferases group 1 257 436 IPR001296 GO:0016757
Apr5g1612 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 69 460 - -
Apr5g1612 463 Pfam Glycosyl-transferase family 4 70 249 IPR041693 -
Apr5g1612 463 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 462 - -
Apr5g1612 463 Gene3D Glycogen Phosphorylase B; 243 442 - -
Apr5g1612 463 CDD GT4_PimA-like 101 456 - -
Apr5g1612 463 PANTHER GLYCOSYLTRANSFERASE 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1612 Apr-Chr5 19787316 19791383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1612 1 463 Glycosyltransferase AT1G19710 72.128 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1612 - - gmx:100791337 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1612 5 19787316 19791383 Apr5g1612 5 19787316 19791383 ECH