Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1599 ATGATGAAGCATTGGTTCTTTTTGTTTCTCTTAGTTGTGTATCTGACAGTGGAGCAGGGTAACCTACTCCACGTAGAAGCAGATGGTGGGTTTGTGAGAACAAGAGGAGTGCAGCTTATGCTGAATGGGAGTCCCTACTATGCTAATGGCTTTAATGCCTATTGGCTAATGTACGTTGCCTCTGATCCATCTCAGAGAACCAAGGTCTCATCAGCTTTTCAAGAGGCTACAAAGCATGGACTTAACATAGCCAGGACTTGGGCTTTCAGTGATGGTGGATATAAACCGCTACAATACGCTCCTGGATCCTACAATGAGCAAATGTTCCAGGGGTTGGACTTCGCAATAGCTGAAGCCAGAAGATATGGGATCAAGTTGGTGTTGAGTTTGGTGAATAACTATGAGAACTTGGGTGGAAAGAAACAATATGTGGAATGGGCAAGGAGTCAGGGCCAGTCCATAAACTCTGAAGATGATTTTTTCACAAATCCTGTGGTCAAGGGATACTACAAAAACCACATTAAGGCTGTACTTACAAGACGTAATAGCCTCACTGGAGTTACTTACAAAGACGACCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAGAACGGTTCAGGCTTGGATTACTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGCTGGAAGCTGGTTTGGAGGGTTTCTACGGGCAGTCAAAGTCAGAATCCAACCCTAGCTTCCATGTAGGAACAGATTTCATTGCAAACAATCAAATTCCTGGCATTGATTTTGCAACAGTACACTCATACCCGGATCAATGGCTATCAAGTTCAGGCTATGAAGACCAAATGTCATTCTTAGGGAGGTGGCTAAATGAGCACATCCAAGATGCGCAGAACACCCTTCACAAGCCACTTCTATTTGCTGAGTTTGGGATTTCTACAAAGAATTTCGGTTCTAACCCAACACAAAGAGACCGGTTATTCAACACAGTATATTCAGCAATATATTCATCTGCAAGTAGTGGGGGTGCTGCTGTTGGAGGCTTATTTTGGCAACTTTTAGCTGAAGGAATGGACTCTTTTAGAGATGGTTACGAGGTTGTGTTAGGTGAGAGCCCCTCAACAGCTACTTTGATTGCTCAAGAGTCTCAAAAACTAAACCGAATTCGTAAGATGTATGCCAGACTTAGAAACATTGAGAAGTGGAATAAAGCAAAGGAAATTAAAGGCTCACAATGGCATGTTGGTGCTAACAGCGGAAACCGAGTATAA 1296 0.4298 MMKHWFFLFLLVVYLTVEQGNLLHVEADGGFVRTRGVQLMLNGSPYYANGFNAYWLMYVASDPSQRTKVSSAFQEATKHGLNIARTWAFSDGGYKPLQYAPGSYNEQMFQGLDFAIAEARRYGIKLVLSLVNNYENLGGKKQYVEWARSQGQSINSEDDFFTNPVVKGYYKNHIKAVLTRRNSLTGVTYKDDPTIMAWELMNEIRCPSDQSGRTVQAWITEMASYLKSIDGNHLLEAGLEGFYGQSKSESNPSFHVGTDFIANNQIPGIDFATVHSYPDQWLSSSGYEDQMSFLGRWLNEHIQDAQNTLHKPLLFAEFGISTKNFGSNPTQRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLAEGMDSFRDGYEVVLGESPSTATLIAQESQKLNRIRKMYARLRNIEKWNKAKEIKGSQWHVGANSGNRV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1599 431 Coils Coil 387 407 - -
Apr5g1599 431 Pfam Cellulase (glycosyl hydrolase family 5) 64 331 IPR001547 GO:0004553|GO:0071704
Apr5g1599 431 PANTHER - 2 417 IPR045053 GO:0004553
Apr5g1599 431 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 2 417 - -
Apr5g1599 431 SUPERFAMILY (Trans)glycosidases 31 386 IPR017853 -
Apr5g1599 431 Gene3D Glycosidases 27 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1599 Apr-Chr5 19692768 19696836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1599 29 414 Glycoside Hydrolase AT5G66460 68.895 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1599 K19355 - gmx:100794126 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1599 5 19692768 19696836 Apr5g1599 5 19692768 19696836 ECH