Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1598 ATGGCTATGATTTCGTGTCAATGTTACCGTTCCGTTGGATCAGACAAACCCTACCTCTTCGGCGGCCAGAATCTCCGCCGTCGCGCTCCTCTCCTTCCCATTTCCGTTTCATTCCGTCGCAAAATATCGTGCATCGCCTCTTCCGCCGTTGCTCAGAAAGTTGGGCAGAAAGATTTTCTTCACTTGGATGATTTTGATAAGGACACTATTTTGAAGATGTTGGAACGAGCCATTGCGGTCAAGGCATTGCTGAAGTCAGGGGACAGGACATTTCGCCCTTTTGAAGGGAAGACTATGGCGATGATTTTTACAAAGCCGTCCATGAGGACACGGGTTTCGTTCGAGACAGGCTTTTCATTGTTAGGTGGCCATGCTATATATTTAGGACCTGATGATATCCAAATGGGAAAGCGAGAGGAGACTCGGGATGTTGCTCGTGTTCTGTCTCGCTATAATGACATCATCATGGCACGCGTTTTTGCTCATCAGGACATACTTGATCTTGCAAAATATGCAACTGTGCCAGTCATCAATGGATTGACAGACTACAACCATCCGTGCCAGATAATGGCTGATGCCCTTACTATGATTGAACACATTGGTCGGTTTGAAGGTACCAAGGTTGTATATGTTGGAGATGGAAATAATATTGTTCACTCATGGTTGTTGATGGCATCCATAATTCCATTTCACTTCGTTTGTGCGTGTCCAAATGGATTTGAACCTGATGGAAAAACAGTTGAGAAAGCAAGGAAGGCTGGAATCAGCAAGATTGAAATAACTAATGATCCCAAAGAAGCTGTTAAAGGAGCTGATGTCGTGTATTCAGATGTCTGGGCCAGCATGGGGCAAAAAGAAGAGGCTGCATACCGCCGCCAAGTGTTTAAAGGATTTCAGGTGGACCAAGATCTTATGCATATGGCTGGTTCAAAGGCTTTTTTCATGCATTGCTTACCAGCAGAGAGAGGGGTGGAGGTGACTGATGAAGTTGTTGAAGCTCCATATTCTATAGTCTTCCCACAAGCTGAAAATCGAATGCATGCACAGAATGCTATAATGCTCCATGTACTTGGCAAGTAG 1080 0.45 MAMISCQCYRSVGSDKPYLFGGQNLRRRAPLLPISVSFRRKISCIASSAVAQKVGQKDFLHLDDFDKDTILKMLERAIAVKALLKSGDRTFRPFEGKTMAMIFTKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLAKYATVPVINGLTDYNHPCQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLMASIIPFHFVCACPNGFEPDGKTVEKARKAGISKIEITNDPKEAVKGADVVYSDVWASMGQKEEAAYRRQVFKGFQVDQDLMHMAGSKAFFMHCLPAERGVEVTDEVVEAPYSIVFPQAENRMHAQNAIMLHVLGK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1598 359 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 56 358 IPR024904 GO:0004585|GO:0006591
Apr5g1598 359 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 57 357 IPR002292 GO:0016743
Apr5g1598 359 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 38 358 - -
Apr5g1598 359 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 57 198 IPR006132 GO:0006520|GO:0016743
Apr5g1598 359 Gene3D Aspartate/ornithine carbamoyltransferase 188 353 IPR036901 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 103 122 IPR006130 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 185 196 IPR006130 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 310 319 IPR006130 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 322 345 IPR006130 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PRINTS Ornithine carbamoyltransferase signature 101 115 IPR002292 GO:0016743
Apr5g1598 359 PRINTS Ornithine carbamoyltransferase signature 134 147 IPR002292 GO:0016743
Apr5g1598 359 PRINTS Ornithine carbamoyltransferase signature 174 188 IPR002292 GO:0016743
Apr5g1598 359 PRINTS Ornithine carbamoyltransferase signature 274 284 IPR002292 GO:0016743
Apr5g1598 359 PRINTS Ornithine carbamoyltransferase signature 336 347 IPR002292 GO:0016743
Apr5g1598 359 Gene3D Aspartate/ornithine carbamoyltransferase 57 187 IPR036901 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 38 358 - -
Apr5g1598 359 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 204 355 IPR006131 GO:0006520|GO:0016597|GO:0016743
Apr5g1598 359 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 56 358 IPR036901 GO:0006520|GO:0016597|GO:0016743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1598 K00611 - gmx:100796780 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1598 5 19684308 19688367 Apr5g1598 5 19684308 19688367 ECH