Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1596 ATGGGAACCCTGGGGAGAGCCATATACAGCGTTGGGTTTTGGATTAGACAGACTGGACAGGCCATTGATCGTCTCGGTTCTCGCCTTCAGGGAGGCTACTACTTCCAAGAACAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGAAAAGGCTCCTGTTGTTGATACGGGTGTATTTGTCGCACCAAGTGCCTCCATCATTGGCGATGTTGAAGTTGGAAGAGGATCATCGATTTGGTACGGATGTGTTTTGAGAGGTGATGTTAATAGCATCAGAGTTGGAAGTGGAACTAACATACAGGATAACTCCCTGGTGCATGTTGCAAAGACAAATTTAAGTGGAAAGGTGTTGCCTACTATTATTGGGGATAATGTTACTGTAGGACATAGTGCTGTTTTACATGGTTGTACTGTTGAAGATGAGGCTTTTGTTGGTATGGGTGCAATACTACTTGATGGTGTAGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGAGCCCTTGTGAGACAGAATACAAGGATTCCTAGTGGCGAGGTTTGGGCAGGCAATCCGGCAAAGTTCCTGAGAAAGCTCACTAATGAAGAGATAACTTTCATCTCCCAATCAGCCACCAATTACACTAACTTGGCGCAGGTCCATGCAGCTGAAAATTCGAAGTCCTTTGATGAAATTGAGTTTGAGAAGGTCCTGCGAAAGAAGTTTGCACGTAAAGATGAGGAGTATGACTCTATGCTGGGTGTTGTTCGTGAGATCCCACCTGAGCTGATTCTTCCTGATAACGTCTTACCTGATAAAGCAGAAAAAGCTCTTAAAAAATGA 822 0.4428 MGTLGRAIYSVGFWIRQTGQAIDRLGSRLQGGYYFQEQLSRHRTLMNIFEKAPVVDTGVFVAPSASIIGDVEVGRGSSIWYGCVLRGDVNSIRVGSGTNIQDNSLVHVAKTNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLTNEEITFISQSATNYTNLAQVHAAENSKSFDEIEFEKVLRKKFARKDEEYDSMLGVVREIPPELILPDNVLPDKAEKALKK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1596 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
Apr5g1596 273 CDD LbH_gamma_CA_like 54 212 - -
Apr5g1596 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Apr5g1596 273 Gene3D Hexapeptide repeat proteins 43 223 - -
Apr5g1596 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
Apr5g1596 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1596 Apr-Chr5 19676173 19679361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1596 93 196 Miscellaneous Gene Families AT2G17640 29.204 9.38e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1596 K01726 - gmx:100777972 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1596 5 19676173 19679361 Apr5g1596 5 19676173 19679361 ECH