Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g1585 | ATGGCATCAAGCTCGGGTTGGACAGCGAAGCAGAACAAGAGATTTGAGAATGCCTTGGCCATCTTCGACAAGGACACCCCAGACAAGTGGCACAACCTGGCCACAGCCGTTGGAGGGAAGACGGTGGACGAAGTGAAAAGGCATTATGAGAAGCTGGTTGAAGATGTGAAGCAGATAGAGGAAGGTCACGTGCCCCTCCCCAATTACAGAAATGTTGCAACAGTGGGAAGCACCGTCAGAGGTTACAATTACATAGATGAAGAGAAAAGGATGAAGGCTCTGAGTCTCCAGTGA | 294 | 0.5 | MASSSGWTAKQNKRFENALAIFDKDTPDKWHNLATAVGGKTVDEVKRHYEKLVEDVKQIEEGHVPLPNYRNVATVGSTVRGYNYIDEEKRMKALSLQ* | 98 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g1585 | 97 | CDD | SANT | 7 | 53 | IPR001005 | - | |
| Apr5g1585 | 97 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 97 | IPR044636 | GO:0003700 | |
| Apr5g1585 | 97 | SUPERFAMILY | Homeodomain-like | 6 | 60 | IPR009057 | - | |
| Apr5g1585 | 97 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 97 | - | - | |
| Apr5g1585 | 97 | SMART | sant | 3 | 55 | IPR001005 | - | |
| Apr5g1585 | 97 | ProSiteProfiles | SANT domain profile. | 2 | 57 | IPR017884 | - | |
| Apr5g1585 | 97 | Coils | Coil | 42 | 62 | - | - | |
| Apr5g1585 | 97 | Gene3D | - | 1 | 66 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr5g1585 | Apr-Chr5 | 19638573 | 19639159 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr5g1585 | - | - | vra:106761704 | 171.785 |
Event-related genes