Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1581 ATGGCGGCGGAAGTGCCGTGCTGTGGAACAAAGTTTTCACTGTACGTGTTGGTGATAATAGGGTTGGTGTGTTTTGCTGGCCTTATGGCTGGTCTCACTTTGGGACTCATGTCTTTGGGCATCGTCGACCTCGAAGTTCTCATGAAATCTGGTCGTCCTCAGGATCGCATCCATGCGGCGAAAATTTATCCAGTGGTTAAGAACCAGCACCTTTTGCTTTGCACGCTTTTAATTGGAAACTCCTTAGCCATGGAGGCTCTTCCCATTTTTCTTGATGCACTCGTGCATCCTGCCGCAGCAATCTTGATTTCGGTCACCCTTATTCTCATGTTTGGCGAGATATTGCCGCAAGCAATTTGTACAAGATATGGATTAACGGTTGGGGCAACACTAGCCCCGTTTGTTCGTGTTCTTCTTGTAGTTTTCTTCCCCGTCTCTTATCCCATCAGCAAGGTTCTTGATTGGATGTTGGGTAAAGGACATGCTGCCCTTTTAAAGAGGGCAGAGCTCAAAACTTTTGTGAATTTTCACGGGAATGAGGCTGGAAAAGGAGGGGATTTAACTCATGATGAGACAACCATCATAACTGGTGCGCTTGAATTGACTGAGAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATGGGTCATAGTAGAGTTCCAGTTTATGCCGGAGAGAAAACAAATATTATTGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTACCTCTACGAAAAATGACCATCAGAAAAATTCCTCGCGTTTCAGAGAACATGCCTCTGTATGATATACTGAATGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTATATAGGGATCTAAACAATAAAAACGAAGCCCCCGAAAAGGTTAAAGATGGGGAACAACTTGATCTCGAGGACAGTGTTAAGAATAAAGGAGAAAACACACCCTTGGATAAAGGTGCTAAATTGGAGTCACGCAATACTTTGATCACCGATGCTAAGATTGATGGTGCTCCACAAACAAAGAAAAGTCCACCAGCAACTCCTGCTTTCAAAAAGCGACATAAGGGTTGTTCATATTGCATCCTGGACATTGAAAATGCTCCCCTACCACTGTTTCCACCCAATGAAGTGGTTGTTGGTGTTATTACAATGGAGGATGTCATTGAAGAGCTTCTTCAGGAGGAGATACTTGATGAAACTGATGAATATGTCAACATCCATAACAAGATAAAAGTTAACATGAATGCTTCTAGGGAGAAGGCTCCTGATGCAAAACTGTTACAGCCTTCTCTAGCAGTTCAAGGACACACACCAACTAATTCAATTTCTACAGCAACTTCTGTAACAGGCTCGCCTACCACAATTGATCAAATCTCTGAAAGTGAGTCACTCAGAAATCAATAG 1476 0.4255 MAAEVPCCGTKFSLYVLVIIGLVCFAGLMAGLTLGLMSLGIVDLEVLMKSGRPQDRIHAAKIYPVVKNQHLLLCTLLIGNSLAMEALPIFLDALVHPAAAILISVTLILMFGEILPQAICTRYGLTVGATLAPFVRVLLVVFFPVSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTMGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMTIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNNKNEAPEKVKDGEQLDLEDSVKNKGENTPLDKGAKLESRNTLITDAKIDGAPQTKKSPPATPAFKKRHKGCSYCILDIENAPLPLFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASREKAPDAKLLQPSLAVQGHTPTNSISTATSVTGSPTTIDQISESESLRNQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1581 491 SUPERFAMILY CBS-domain pair 195 417 IPR046342 -
Apr5g1581 491 Gene3D - 189 329 IPR046342 -
Apr5g1581 491 Gene3D - 345 423 IPR046342 -
Apr5g1581 491 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Apr5g1581 491 MobiDBLite consensus disorder prediction 456 491 - -
Apr5g1581 491 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 476 IPR045095 GO:0010960
Apr5g1581 491 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Apr5g1581 491 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 476 - -
Apr5g1581 491 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1581 Apr-Chr5 19606787 19611112 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1581 K16302 - gmx:100804572 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1581 5 19606787 19611112 Apr5g1581 5 19606787 19611112 ECH