Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1579 ATGGCTGACCGCACCTCCGCCACGCCCCTCCACATCTCCGCTGCACCTCCTTTTCAGATCTCCAAAGATTTCCATGGCTCTGACAACCCTATTCCTCTTTCGCCACAGTGGCTTCTGCCAAAGCCAGGGGAGAGTAAACCTGGAATAGGATCTGTGGAAAACCATGTGATGTCAACTCCACCATATGGCAATCGCCCAGAGACTGTTAAGACATCTGGAAATGGAGATGATGTGAATGATGGCCATAAAAGGAAGGATGTCTTTTGGCCATCCATGCTTGACTCTGGAAGTGGACGTCGCGACCGTTGGCGAGATGAAGAGAGAGATACTAAGTCCTCCATACGCAAGGATCGTTGGAGGGCTGCAGACAAAGACCTAACTGATCCCCGTAGAGTGGATCGATGGACTGAAAATTCATCCACGAGGCACTTTGGAGAAGCACGTCGCAGCACATCTGATAGATGGAATGATTCAGGTCATAGAGACACTAGCTTTGACCAGCGGCGTGAGAGTAAGTGGAACACACGCTGGGGTCCTGATGATAAGGAGCCAGAAGGTCTTCGTGAAAAATGGAGCAACCCAGGTAAAGATGGTGATCTGCACATTGAGAAAGGTTTGGCTAACATTTCCAATCCTAGTAAGGATGAGAAGGAAGGGGATCATTACCGTCCATGGAGACCTAACTCCTCACAAAGTCGTGGAAGGGTAGAGCCTCCCCATCTCCAGAATGTGACACCAAACAAGCAAGTGCCTGCATTTTCATATGGGCGTGGCCGTGGTGAGGATACACCTCCAGTGATTACTCTTGGACATGCTCGGCTTGGATCTGGTGGTAGCTCTATGAATAGCACATATATGCATACTCTATATCCTGGAATTGTATTGGATAAAATGGAAAGTCAGCATGGAGAAGGCTGTCCCTTTAGATACAGTAGGACAAATTTGCTGGATGTGTACAGAATGACTGATATGCGTACAAATAGAAAAGTAGTCGGTGATTTTGTGCAGGTACCTTCTCTTACACAGGATGATCCATTGGAGCCTCTAGCTCTTTGTGAACTGAAGTCTGAGGAACTGTCAGTATTAAAGGATATTGACAACGGGGAAATAATTAGTAGCAGTGCACCTCAGGTGCCAAAAGATGGGCGGAACTCAGCAGAATTTACACATTCAAGACGAATGAAGCTTTCAGATGCACCTTTCCAAGATAGAGGTGAAGATGGTGGTTCTTACAGAGTTGCTGATGAGGCATTTAATAATAGAGGATCAGCATTTGAAGAAAATAATTCGGTTCATCCTGGTGCTGCATGGCATGTCATGCCACTGGGTGAACATGCAGGCACAATCATGCATGATAGCAGAGATGTGTCTAGTGATATTAAGTCAAGGAACTCAGATGTGAGCTGGTCACACCAGCCAAAAGATCCTCATACTCAGTGGGATGGTAATTTGGATTATTTATCTGAAGCCAGAGATATGGCTAAGTGGCAGTCTAATGGAGATCCCATTATTAAGAGGCAGCTAACTGGCATTTTGGACAGTGAACTTGAAACCAGGAGAGTTCCACAGACATGTCCAGAGGACTTATCCCTTTTTTATAAAGATCCTCAGGGTCAAGTTCAGGGCCCGTTCAAAGGAATTGATATTATTGGTTGGTTTGAGGCTGGATATTTTGGTATAGATTTACCTGTTCGCCTGGAACATGCAGCACCTGACTCCCCTTGGTTACAACTTGGTGATGCCATGCCCCATTTACGAGCTAAAGCCCGACCACCACCTGGGTTTTCTGCAGCAAAACTGGACTGTGCAGAGGCACCTTGTCGGCAAAATTCCAATACATTTGGGAACATACATACTGGTTTAAGTGATGTGGAGATGTTGAGAAATGATTCTATGCATAGGAATTCTACTACTGAAGCTGAAAATAGATTTTTGGAGTCACTCATGTCTGGTAGCAAGAGCAGTCCCCCAATAGATAGTCTTGCATTTTCAGAAGGTTTGCAAGGGTTTCTTGGTAACAATTCTGGTAATTTGGGCCCATCAGGAGTAGATGGTGGAAACAACCTTTACTTACTAGCCAAGAGGATGGCACTTGAAAGGCAGCAGTCCTTGCCCAATCCTTATCCATACTGGCCAGGGAGAGATGTAGCACCCCTTCCACCAAAATCTGACATTTTTCCAGATGTAGTACAGCAGTCAAATTTCTTGTCTCCAGTGAATAACAATTCTCATCAGCTTCAGTCCCAAAATCCTGAGTTGATCTCAATAATCCAAGGGTTATCCGACCGGTCATCCACAGGCTTAAATAATGGTATTGCTGGATGGCCAAATTGTCCCTCACAAAGTGGATTGGATCCCCTTCAGAATAAGATTGACTTGCATCATGATCAGAATTTTCTTCAAATGCCATTTGGAATTCAACAACAAAGGTTGCAGACACCAAGCCAATTGTCTTTAAATAACTTAATAGCTCAAACTTCAGATAACCCATCTAGTATTTTGACAGCAGATAAGTTACTTTCTTCTGGTTTATCCCAAGATCCCCACATGTTGAATATGTTGCAACAACAATACTTACTGCAGTTGCATTCTCAGGCTGCTCCTTCACAGCAGATGCCTTTGTTAGATAAATTCCTATTGCTGAAGCAGCAGGAGGAGAAACAGCTATTATTACGCCATCAACAGCAGCTGTGTTCTCAAGTGCTGCAGGAGCACCAGTCTCACCATCCGTTTGGTGAATTTTCTTTTAAACAGTTGCAGGGAGGTGGAATACCAATGGAGAATTTGCATGTGGATATTTCTCAAATTCAACCTCCGAAAGAGATTTTTCCCATGAGCTCACAGGCACCTATTACCACTGTGCATGATGAGCTTACTACTAATTCTTTGGATTTACCTCTGCGAGTAACTCCGGACCATAGCTATAACATAAGCAGTGAATCTTCTGTGCAGCTGCCTCACCAAATAATTGGGAATATTAGTCATCAGAAGAGTTGGGATCCTACACTTCCTGTGCAAATTAATGAAAAGTACCAGAAGGAAACATTGCCCGCATCAGGTTCCGTTGAAAGATCCCTATTGCATGGGCAGAACAGAGCCAAAGAAGAAACTACCATTGTGCAGAAACCTCTTTCTTTTCCTGATTGTACTGCTAAATCTGTGGTGCAGATGCCAGATGATAGTTGTAGAGCTGATGGTATCCTTGAGAAGGCAACTTTTGATTCTGGTGAGAATTCTCAACCTGTACAGTGTGATGCTATGACTTCATCTGGATCTTGTGGGATCGAGTTACCACTAACAGGTCAACTTAGTAAGGATGTGGAGATTAAATCAGATAGTCCTGAACAGCACCAAGCTGGAAGAGACAGCTCAAGTATGGAGCCTTCTGTGGTGGATGCAAGAAATGTTGAAGCACGTGAACCCAAAAAGACTAATGAGAAGAAATCTAAGAAGCAAAAATCTTCCAAGTCTCAGTCTTCTGAACAAGCAAAGGGATTTGTAAAAAATGTGACTTTGCATCAGTCAAGGAAACCAGAAACTGAGAAGCCAATTTATAGTGAAGAAAATTTGGGGGAAGCCAAGGAACCAACTCATGAAACATATCTTCAACAAACAAAAGGTAAGAGCAACCAGTCTGGAATTTCAACTGCAGAGGCAGATGACAATCGAGAAGTTAGTGGTCTACTTACTAATATTTCAGGAGGCATCACTGAAACAATTGTTGAGAATGAGTTGAAGGCAGTCAATGCTCTTGGCACAAAGAATACTGAATTACCTTCAGCGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCAAAGTCGTTCTTAGAAATTCAACAGGAAGAACAAAAAAAGGTACAGACAGAAATATTTGTATCTGAGGTTGCTACTCCTGTGAGTTCCATGAGTTTGACTACTCCTTGGGTTGGAGTTGTGGCTAATCCAGACTCTATCAAGGTGTCTAGTGACAGACTCAGAGAAGCAGACAATACTGAATATCTATCTAAATGTGGAAGTCATCAAAATGGCAAGAGCAAGAAAAGCCCATTACATGATCTATTGACAGAAGACGTAAAAAAATCTAGTGAAATAGATGGCAAGGTTCCAGACATTATGCTGCCCTCACAAAATTTAGAACCAATAGATGATGGGAACTTTATTGAAGCTAAAGACGCCAAAAGAAGCCGGAAAAAATCTTCAAAATCAAAGAGTGCAGGGGCTAAGATTTCATTGCCAGTTGCTTCTAGTGAAGTGCCTCTAAGTTCAATTCCCAATGAAAAGGGGAAAAGTTCCCGCTCTGTTCCACAGGAGAAAGAACAACTACCGGCCATCCCTTCAGGACCCTCTTTGGGAGATTTTGTTCTTTGGAAAGGAGAGCCAACAAGTCCATCTCCTTCTCCAGCATGGACTTCTGATTCTGGTAGGGTTCCTAAACCAGCAGCATCATTAAGGGACATTCAAAAGGAGCAGGAGAAAAAATCTTCTGCAGTTCCCCCAAACCCATTGCCTACCCCTCAGAAATCACAGCCTACCCAAGTTTCTCGAAGTAATGGTTCACCATGGCCCGTTTCAGCTTCATCTCCGTCAAAAACTGCACCATCTAGCCAGATAAAAGCCCAAGCTTCTCTGTCAAAATACAAAGGGGATGATGACTTGTTCTGGGGTCCAATTGAGCAATCTAAGCAAGAAACTAAGCAATCAAATTTTCCTCAGCTTGCCAGTCAGGGGAGCTTGGGTTCTAAAAATTCTTCCATGAAAGGTAATTCACCTGCATCATTAAGTCGACAAAAATCTGGGAATGGCAAACTGACTGAGCGATCTCTGTCATCATCACTTGCCTCTTCTCAATCACTGCTGAAACTGAAAAAAGATGCCATGACTAAGAATTCTGAAGCCATGGACTTCAGAGTATGGTGTGAGAATGAATGTGTTAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAACAATCTAGATCCGAAGCAGAGATGTTTCTCATAGAAAATCTTGGATCATTTGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGACTTCCTTCCTTCAGATGTGTTAGAACTAGCTTTTCAAACTGTGAATGATCAGAAAGTTGCTGGAGGCATGATATCTGGAAATATAGATGTACAGGATCTAGGCCACACTGAAGGATCCTCCTCTAGAGGCGGAAAGAAGAAGGGTAAGAAAGGTAAAAAGGTTAGCTCTTCAGTTTTGGGATTCAATGTCGTAAGTAACCGGATAATGATGGGAGAGATCCAGTCCGTAGAAGACTAA 5313 0.4321 MADRTSATPLHISAAPPFQISKDFHGSDNPIPLSPQWLLPKPGESKPGIGSVENHVMSTPPYGNRPETVKTSGNGDDVNDGHKRKDVFWPSMLDSGSGRRDRWRDEERDTKSSIRKDRWRAADKDLTDPRRVDRWTENSSTRHFGEARRSTSDRWNDSGHRDTSFDQRRESKWNTRWGPDDKEPEGLREKWSNPGKDGDLHIEKGLANISNPSKDEKEGDHYRPWRPNSSQSRGRVEPPHLQNVTPNKQVPAFSYGRGRGEDTPPVITLGHARLGSGGSSMNSTYMHTLYPGIVLDKMESQHGEGCPFRYSRTNLLDVYRMTDMRTNRKVVGDFVQVPSLTQDDPLEPLALCELKSEELSVLKDIDNGEIISSSAPQVPKDGRNSAEFTHSRRMKLSDAPFQDRGEDGGSYRVADEAFNNRGSAFEENNSVHPGAAWHVMPLGEHAGTIMHDSRDVSSDIKSRNSDVSWSHQPKDPHTQWDGNLDYLSEARDMAKWQSNGDPIIKRQLTGILDSELETRRVPQTCPEDLSLFYKDPQGQVQGPFKGIDIIGWFEAGYFGIDLPVRLEHAAPDSPWLQLGDAMPHLRAKARPPPGFSAAKLDCAEAPCRQNSNTFGNIHTGLSDVEMLRNDSMHRNSTTEAENRFLESLMSGSKSSPPIDSLAFSEGLQGFLGNNSGNLGPSGVDGGNNLYLLAKRMALERQQSLPNPYPYWPGRDVAPLPPKSDIFPDVVQQSNFLSPVNNNSHQLQSQNPELISIIQGLSDRSSTGLNNGIAGWPNCPSQSGLDPLQNKIDLHHDQNFLQMPFGIQQQRLQTPSQLSLNNLIAQTSDNPSSILTADKLLSSGLSQDPHMLNMLQQQYLLQLHSQAAPSQQMPLLDKFLLLKQQEEKQLLLRHQQQLCSQVLQEHQSHHPFGEFSFKQLQGGGIPMENLHVDISQIQPPKEIFPMSSQAPITTVHDELTTNSLDLPLRVTPDHSYNISSESSVQLPHQIIGNISHQKSWDPTLPVQINEKYQKETLPASGSVERSLLHGQNRAKEETTIVQKPLSFPDCTAKSVVQMPDDSCRADGILEKATFDSGENSQPVQCDAMTSSGSCGIELPLTGQLSKDVEIKSDSPEQHQAGRDSSSMEPSVVDARNVEAREPKKTNEKKSKKQKSSKSQSSEQAKGFVKNVTLHQSRKPETEKPIYSEENLGEAKEPTHETYLQQTKGKSNQSGISTAEADDNREVSGLLTNISGGITETIVENELKAVNALGTKNTELPSARAWKPAPGFKAKSFLEIQQEEQKKVQTEIFVSEVATPVSSMSLTTPWVGVVANPDSIKVSSDRLREADNTEYLSKCGSHQNGKSKKSPLHDLLTEDVKKSSEIDGKVPDIMLPSQNLEPIDDGNFIEAKDAKRSRKKSSKSKSAGAKISLPVASSEVPLSSIPNEKGKSSRSVPQEKEQLPAIPSGPSLGDFVLWKGEPTSPSPSPAWTSDSGRVPKPAASLRDIQKEQEKKSSAVPPNPLPTPQKSQPTQVSRSNGSPWPVSASSPSKTAPSSQIKAQASLSKYKGDDDLFWGPIEQSKQETKQSNFPQLASQGSLGSKNSSMKGNSPASLSRQKSGNGKLTERSLSSSLASSQSLLKLKKDAMTKNSEAMDFRVWCENECVRLIGTKDTSFLEFCLKQSRSEAEMFLIENLGSFDPDHEFIDKFLNYMDFLPSDVLELAFQTVNDQKVAGGMISGNIDVQDLGHTEGSSSRGGKKKGKKGKKVSSSVLGFNVVSNRIMMGEIQSVED* 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1 249 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 210 224 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1507 1542 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1723 1745 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 462 476 - -
Apr5g1579 1770 Pfam GYF domain 532 569 IPR003169 GO:0005515
Apr5g1579 1770 ProSiteProfiles GYF domain profile. 528 579 IPR003169 GO:0005515
Apr5g1579 1770 MobiDBLite consensus disorder prediction 97 203 - -
Apr5g1579 1770 SMART gyf_5 529 584 IPR003169 GO:0005515
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1133 1157 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1202 1219 - -
Apr5g1579 1770 CDD GYF 528 585 IPR003169 GO:0005515
Apr5g1579 1770 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1770 - -
Apr5g1579 1770 SUPERFAMILY GYF domain 520 585 IPR035445 -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1415 1430 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1109 1219 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 454 476 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1174 1201 - -
Apr5g1579 1770 Gene3D - 517 597 IPR035445 -
Apr5g1579 1770 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1770 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 225 249 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1360 1542 - -
Apr5g1579 1770 MobiDBLite consensus disorder prediction 1561 1609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1579 Apr-Chr5 19591734 19600699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1579 - - aprc:113864691 3400.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1579 5 19591734 19600699 Apr5g1579 5 19591734 19600699 ECH