Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1578 ATGTTCACTGGCTCCGTCACCCTCAAATGGTCTGCAACCAACAACCAAGACTTCGATTCTATGATTCTCCAAGATCACGACGTCCTGGAAGTGGAGGAGAGAGAGAAAGTGGTGAGGCACATGTGGGATGTGTACAGCCACAGCAACTCGGTTCGATTACCCAAGTTTTGGTCTGAAGCTTTCGAAGCTGCTTACGAGGAATTGATGAGTGATATTGGTGGCGTCCGAGACGCAGCCGTTTCAGAAATTGCCAAGATGTCACTGTGCTCTCTTCCTCTTCTTCTTCAATCACAATCGGTTGTGCAGACCATAACGGGATCAAGAAAAATTAAGCAAGCGAAGAGTAACATGAACAGTACAGTCAACAGTGACCAATAA 378 0.4656 MFTGSVTLKWSATNNQDFDSMILQDHDVLEVEEREKVVRHMWDVYSHSNSVRLPKFWSEAFEAAYEELMSDIGGVRDAAVSEIAKMSLCSLPLLLQSQSVVQTITGSRKIKQAKSNMNSTVNSDQ* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1578 125 PANTHER PROTEIN, PUTATIVE-RELATED 1 118 - -
Apr5g1578 125 Pfam Protein of unknown function (DUF1195) 1 92 IPR010608 -
Apr5g1578 125 PANTHER OS03G0411600 PROTEIN 1 118 IPR010608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1578 Apr-Chr5 19588823 19590952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1578 - - aprc:113865924 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1578 5 19588823 19590952 Apr5g1578 5 19588823 19590952 ECH