Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1571 ATGGAGAGATTTTATTATTCTCAACGAGAGAGCGTTCTTTTAGGGTATAATTATAATAATAATAAGTCCCTAATAGAGAGGGCGTCGTCGACGAATCCGAGCACGCCGCAGAGAAATTGGGACGTTGATTTCACGGACGTCTTCGGGGGGCCGCCACGGCGGTCTTCGGTAAATGAAACGCGGCAGAGTGTGAGTGAGTTGGAGGAGTTGAGAGGAGAGGAAGGGGAAAGTGGTTGGTGTGAGAAACCAGTATTTGGGGAGGATAATGGAAACAGAAGGCGTTTCCCAAACAAGAGCAATGACTTTTTTTATGACATATTCGGAGGGGAGGAGTCACCGAGCGTATGTTCGACGCCGAAGAAGCGCGTGGGGGAGTCTTTCACGGCGAGAGTGTTGAGTCCTGCACGTCCTCTGCCTCCTGCTGCTGATCCCGTTGGTTTCCCAGTACCATTCAGCCTTCCAGCCAAATTGACAAATGGGGTGGACCTTCCAACATTTGGTTCCCCAACTAGGAGTAGGAACCCTCTCGACAACATCGACGATGGTATTGCTGGTTCAAATGGATTAGGCTCTTCAGATTCTCATCTATCTAGATTTTCAACCCAGTGCAAGGAGTTGAAAAATGATTTAAACCCACATTTCCGACAAAGTCTTCTTTCACAGGAATCTTCGAACATGAGCATATCAGATCAAGCAGACACAGGAAGCAATATGAAACAACAGATATCTATTAGTGAAGTTTCACGTAGTACCACTAATTGCGAGTTCCATTTCTCAATATACAAATGGGCAAGCAAAGGGGTACCGTTGGTGATGCCTTTTAGGACAGAGAGAGCCTCAAGGACAAAAGAGAAGGTTAAACTTGAGAGATGCTCAAGCGCTAAGGAATGGAAGATCAATGAGATTACCCCACAGAATCCTATAGCAAACAAGGGTTCTTCTTTGCTGATTAATAGAAAACAAGATGTGTCAACTACTTCCACAGCTACTAAAAAAGGGGCCGATTCGCATCAAATTGTGGAACAAATACTTTCTGCCAAAGCTCAATCAGATACATCGAGCAGTCCTAAAACTGTTACTAAAGAAGTTCCTGGTAGTTCTACCTCGTGTGACGATGGAGCAGTAGAATCAAGTACTCATTCTAAAACCGAGATCGGCTTCTCTGGAAAAACTGTAACAGCAAACCAAACTCAGAAGCTTCAGCCCAAACAGCTACATTCTCTGCTGAAAGAAGATGATGAGAAACAAGATTGTGATGAGGTGATTATAAGGGAGAATGAAGAAAACAAGATCAAAACCACAAAAAAGTTATCTGCTATTTTTGATGTTGCCGTGAATCCTAAGAAACAAGAAGAAAAAGTTTTATTGAGAGATGTAGGACATAGCAAAGCTTCTTCCGAGGGTTCATTAAACTCAGGTGAGAATATGGGGAAAGGTCGAGTTAAAGGAAAGGTCAAAGAATTCGTTCGAATTTTCAACCAAGAAGCTGTAACAAAGCCCAAAGTTGATTTCAAATCTCAACTTCTGGGTTCTATACACAAGCAGAGAGATGCTTTAAGGACAAAGATTGAAGTGGAAGGTAATCATGAACAATCCAAAAAGGACAACTCTGCCACAGAGACTACCAATACCTTTGCTAATAATTTGTCACATCAAGACGATAACTCAATGTCAGCAATTCCTGATATATCGTTTGCTGTTGTTGGAGATAAAGACGAGTTCTTCCATGGGAATTTCATGATACGAGTAATAGCCCAAGATGAGGGCGAGATCTTACAAAACCAAGAAACTCAAGAAATCCAAGTCATTGACAATAAGATACAACAGTGGTCTAAAGGAAAGGAAGGAAACATACGCTCCCTGCTATCAACATTACAATACGTACTTTGGCCGGAGTGTGGCTGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAATGCGGTGAAAAGGGCATATCAAAGAGCTTTACTGTGTCTGCATCCAGATAAGTTGCAGCAAAAGGGTGCCGCTTCACAGCAAAAATACATTGCAGAAAAAGTTTTTGACATTTTACAGGTAATGCAAGGCAACTGA 2076 0.4249 MERFYYSQRESVLLGYNYNNNKSLIERASSTNPSTPQRNWDVDFTDVFGGPPRRSSVNETRQSVSELEELRGEEGESGWCEKPVFGEDNGNRRRFPNKSNDFFYDIFGGEESPSVCSTPKKRVGESFTARVLSPARPLPPAADPVGFPVPFSLPAKLTNGVDLPTFGSPTRSRNPLDNIDDGIAGSNGLGSSDSHLSRFSTQCKELKNDLNPHFRQSLLSQESSNMSISDQADTGSNMKQQISISEVSRSTTNCEFHFSIYKWASKGVPLVMPFRTERASRTKEKVKLERCSSAKEWKINEITPQNPIANKGSSLLINRKQDVSTTSTATKKGADSHQIVEQILSAKAQSDTSSSPKTVTKEVPGSSTSCDDGAVESSTHSKTEIGFSGKTVTANQTQKLQPKQLHSLLKEDDEKQDCDEVIIRENEENKIKTTKKLSAIFDVAVNPKKQEEKVLLRDVGHSKASSEGSLNSGENMGKGRVKGKVKEFVRIFNQEAVTKPKVDFKSQLLGSIHKQRDALRTKIEVEGNHEQSKKDNSATETTNTFANNLSHQDDNSMSAIPDISFAVVGDKDEFFHGNFMIRVIAQDEGEILQNQETQEIQVIDNKIQQWSKGKEGNIRSLLSTLQYVLWPECGWKPVPLVDIIEGNAVKRAYQRALLCLHPDKLQQKGAASQQKYIAEKVFDILQVMQGN* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1571 691 MobiDBLite consensus disorder prediction 220 244 - -
Apr5g1571 691 SUPERFAMILY Chaperone J-domain 593 686 IPR036869 -
Apr5g1571 691 Gene3D DnaJ domain 594 689 IPR036869 -
Apr5g1571 691 MobiDBLite consensus disorder prediction 166 187 - -
Apr5g1571 691 MobiDBLite consensus disorder prediction 458 479 - -
Apr5g1571 691 PANTHER J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 1 687 - -
Apr5g1571 691 MobiDBLite consensus disorder prediction 51 72 - -
Apr5g1571 691 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 687 - -
Apr5g1571 691 MobiDBLite consensus disorder prediction 346 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1571 Apr-Chr5 19534560 19541009 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1571 - - gmx:100820241 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1571 5 19534560 19541009 Apr5g1571 5 19534560 19541009 ECH