Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1570 ATGGAGTCAGAACTTAAAGACCTGAATTCGAAACCGCCGAAATCAAATGGCAATAGCAATAGCATTCGGGATGATCGTCCTCTGCTGAAGTCGGAGTCGCTCTTCTCCGACAGCGCGGTGGAACTCCAAGACCTCGAGAAGAAATTCGCCGCGTATGTTAGGCGCGACGTGTACGGAACTATGGGTCGCGGAGAGTTGCCTACAAAGGAGAAGCTCTTGCTCGGTTTCGCTTTAGTTACTCTTCTCCCTATTAGAGTCCTTCTCGCTGTCACCATCTTGCTCTTCTATTACTTCATTTGTAGGGTTTGTACACTCTTCTCTGCGCCTAATCGTGAGGACGAGCAAGAAGATTACGCTCACATGGGTGGCTGGAGGAGAACCGTTATTGTTGCCTGTGGGAGAGCTCTCTCTAGAGCCATGCTCTTCATTTTCGGCTTTTATTGGATCCCCGAATCCCGCCATGCTGTTCTCAACTCTACCTCTCAGAAGGAAGACAAGCATCAGCCTGAAGAGTTGGGAAGACCTGGTGTCATAATATCTAATCATGTGTCATACTTGGATATTTTATATCACATGTCATCCTCGTTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTTGTTGGTCTCATCAGCAAGTGCCTTGGTTGTGTCTATGTTCAGCGGGAATCAAAGTCATCGGACTTCAAGGGTGTTTCAGCTGTTGTTACTGAAAGAATTCGAGAAGCTCATCAGAATAAGTCTGCTCCATTCATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGACTTCCTCCTTCCGTTCAAGACTGGTGGTTTTTTGGCAAAGGCACCAGTACTTCCTGTGATTTTAAGATATCATTACCAGAGATTTAGCCCCGCCTGGGATTCCATATCTGGGGTGCGACATGTGATATTTCTCCTCTGTCAGTTTGTAAATTATATGGAGGTTGTTCAATTTCCTGTTTACTATCCCTCACAGCAGGAGATGGATGACCCCAAACTATATGCTAATAATGTTAGAAGGCTAATGGCTACTGAGGGTAATTTGATACTTTCCGATATTGGACTAGCCGAAAAACGAATATATCATGCTGCTCTCAATGGTTTGTTTTCCCAATGCTAA 1137 0.4494 MESELKDLNSKPPKSNGNSNSIRDDRPLLKSESLFSDSAVELQDLEKKFAAYVRRDVYGTMGRGELPTKEKLLLGFALVTLLPIRVLLAVTILLFYYFICRVCTLFSAPNREDEQEDYAHMGGWRRTVIVACGRALSRAMLFIFGFYWIPESRHAVLNSTSQKEDKHQPEELGRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSAVVTERIREAHQNKSAPFMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILRYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVVQFPVYYPSQQEMDDPKLYANNVRRLMATEGNLILSDIGLAEKRIYHAALNGLFSQC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1570 378 MobiDBLite consensus disorder prediction 1 25 - -
Apr5g1570 378 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 15 374 - -
Apr5g1570 378 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 15 374 - -
Apr5g1570 378 SMART plsc_2 176 291 IPR002123 GO:0016746
Apr5g1570 378 CDD LPLAT_LPCAT1-like 138 365 IPR045252 GO:0008374
Apr5g1570 378 MobiDBLite consensus disorder prediction 10 24 - -
Apr5g1570 378 Pfam Acyltransferase 169 286 IPR002123 GO:0016746
Apr5g1570 378 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 79 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1570 Apr-Chr5 19528211 19534548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1570 1 377 Acyl Lipid Metabolism Gene Families AT1G80950 65.743 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1570 K13510 - gmx:100820536 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1570 5 19528211 19534548 Apr5g1570 5 19528211 19534548 ECH