Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1569 ATGCCCGTCGCCACTAAGCTTCGCTCTTACGCTAAACCCGCTTCTGAACCGCGAGCCATTTTGAAACCCGCCGGAAACAGAGTCGCTGTTTCTGAAGAGCCGAAACGCGAGAAGGAGAACATGAAGAATCCGCAGCGCACGAGAAAAGAGGCACCGCAAATTCCTGACTCCGTTGTGCAAAGTAACGTGTCTTTAGACAGCACTTGTTCCTTGGATTCGTCTGGCAAAAAGGTAAACTCCGGAACTGCAAGTAGGAGAAGCGTGAAGCGTAACGGGTTTAAGCCCGTAAGGGTTGTGCCCGATGCCATGGATGTAGCTACCTTGAACACGCCTTTCAAGACCACGGCACCGCCCAAGAGATGCGAATGGATCACTCCAAATTCTGACCCTCTCTATATTGCTTTCCACGATGAAGAGTGGGGTGTTCCAGTTGACGATGATAGAAAGTTATTTGAGCTTCTAGTCTTTTCACAAGCATTAGCAGAACACAGTTGGCCAGCAATTCTTAAACAGAGAGATATTTTCAGGAAGCTTTTTGAAAATTTTGAACCATCATCACTTGCACAGTTTACTGAAAAGAAGTTGCTAACACTGAAAATAAAAGGCAACTCATTGTTGTCAGAACCAAAGCTCCGTGCCATTGTGGAAAATGCTAAACAACTACTCAAGATCAAGCAGGAGTTCGGTTCATTCAGCAATTACTGCTGGAGATTTGTTAACCGGAAACCAATAAGAAATGAATTTAGATACGGACGTCAAGTACCTGTGAAGACCCCAAAAGCGGAACTCATTAGCAAGGACATGATGCGCAGAGGATTCCAATGTGTGGGACCGACTGTAGTTTATTCGTTCATGCAGGTAGCAGGGCTCGTTAATGACCACCTATTAACATGCTACAGGTACCAGGAATGCAATGTGACAACCAAAAACGAATTGAAAACTGAGATTAATGATGAGAAGGTACAAAATGAAACCACGGAGTTGACACAAATTCAATTACTGAAGGTCGTTTAA 1014 0.4458 MPVATKLRSYAKPASEPRAILKPAGNRVAVSEEPKREKENMKNPQRTRKEAPQIPDSVVQSNVSLDSTCSLDSSGKKVNSGTASRRSVKRNGFKPVRVVPDAMDVATLNTPFKTTAPPKRCEWITPNSDPLYIAFHDEEWGVPVDDDRKLFELLVFSQALAEHSWPAILKQRDIFRKLFENFEPSSLAQFTEKKLLTLKIKGNSLLSEPKLRAIVENAKQLLKIKQEFGSFSNYCWRFVNRKPIRNEFRYGRQVPVKTPKAELISKDMMRRGFQCVGPTVVYSFMQVAGLVNDHLLTCYRYQECNVTTKNELKTEINDEKVQNETTELTQIQLLKVV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1569 337 PANTHER OS04G0501200 PROTEIN 1 325 - -
Apr5g1569 337 MobiDBLite consensus disorder prediction 1 89 - -
Apr5g1569 337 MobiDBLite consensus disorder prediction 54 87 - -
Apr5g1569 337 Pfam Methyladenine glycosylase 127 300 IPR005019 GO:0006284|GO:0008725
Apr5g1569 337 Coils Coil 309 329 - -
Apr5g1569 337 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 1 325 - -
Apr5g1569 337 SUPERFAMILY DNA-glycosylase 119 304 IPR011257 GO:0003824|GO:0006281
Apr5g1569 337 MobiDBLite consensus disorder prediction 29 46 - -
Apr5g1569 337 Gene3D Hypothetical protein; domain 2 119 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1569 Apr-Chr5 19523169 19526690 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1569 K01246 - gmx:100306457 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1569 5 19523169 19526690 Apr5g1569 5 19523169 19526690 ECH