Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1567 ATGCTGGAAGCAATGGAAAGTTCAGTGAATGGTGGGTTTTCGCAGTTACAGAGCTGCGGAGACAGCAGCGAAGAGGAGTTATCTGTGCTTCCTCGTCACACGAAAGTGGTTGTAACCGGAAACAACCGCACCAAATCTGTCCTCGTTGGTCTCCAAGGCGTCGTTAAGAAAGCCGTTGGGTTAGGTGGTTGGCATTGGCTGGTTCTTACTAATGGTATTGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTGATTGAAGCACCCACCGGAAACGAGGAAGACGATGACCTTGAATTTGAAAATGTGCAGTGGAATGGATCAGATATGGCATCGGACGACACACAGAAGTCCCACAAATCGAGGCACAGAATGCATAGATCGTTGGGATTATCTCACAAGTCCATGAGTAGGTCCTTCTCTGGCGATTCACAGTCTAAGGGGTCCGTTTCTATGCCTCATGGGGCCAGGATCGACTTGAGCAAGCTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTAGTGGATGCGGTTCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAAAGGCATTTCATGTCTCAGCAAATGGACGAGTTGCAGGTGATTGTGGGATTTGTTCAAGCTGCAAAGAGGCTTAAGACTGTGTGCAAATGA 669 0.4753 MLEAMESSVNGGFSQLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQKSHKSRHRMHRSLGLSHKSMSRSFSGDSQSKGSVSMPHGARIDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1567 222 MobiDBLite consensus disorder prediction 131 150 - -
Apr5g1567 222 MobiDBLite consensus disorder prediction 106 152 - -
Apr5g1567 222 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 222 - -
Apr5g1567 222 PANTHER SAP30 1 222 IPR024145 -
Apr5g1567 222 Gene3D - 136 222 IPR038291 -
Apr5g1567 222 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 162 215 IPR025718 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1567 Apr-Chr5 19505809 19509176 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1567 - - gmx:100806535 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1567 5 19505809 19509176 Apr5g1567 5 19505809 19509176 ECH