LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1565	ATGGAGCTAATGGTTCGGCGCACTTCGTGCACGCTGTCCAGATTTCACTGCGAGCTTCGATTCGCCGTGGTTGTTTTCGAGATTATATTGATATTGGCATGGGCAGAAGTCTACAATGCAAAGCCCCACGAACACCAACTTCAATGGGGAGGCTTGGAAAGGAATACTGCGAACATTGCCTCGCACTCTTGCATACACGACCAGATTCTAGAACAGAGGAAGCGTCCTGGTCGCAAGGTGTACTCAATTACCCCGCAGGTTTACGAGCCTGGTCTCTTGAAGCACCTTCAGCATAAAGGTAGGGCTTTACTTGACGTGTCAACATCACCAAGGCCTCTACAGGATGCAAAGAAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCACCTGACAGAGATTGTCGAAAAATTGGTGATATTGTCAAACTGGGGGAGCCTCCTGTGACTTCTCTTGGTTTTCCTTCTTGCAATCCTCACGGTAATCCTCCAATCTTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATCTCAGGAGAGGACAAAAAATGTCGCCTTCGTAAGGCATTAGGTCAGACAGCTGAATGGTTTAGGAGAGCATTAGCTGTTGAACCTGTCAAGGGGAACTTGCGTTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCTCGTGGATATATTGAGGAGGGTGTCTCTGATGCCGACTTGGTTCTTTTGGTGACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCGGTGGCATGTGAACGAGATCAATGGGGCCGTGCTATAGCTGGACATGTTAATGTTGCACCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTGTCAGCTACCCTGATACATGAGGTTATGCATGTTCTTGGTTTTGATCCACATGCCTTTGCTCATTTTAGAGATGAGAGGAAAAGACGGCGTAATCAGGTTACTGAACAAGTTATGGATGAAAAGCTCCGACGGATGGTAACACGTGTAGTGCTTCCTCGTGTTGTCATGCAATCTCGATATCATTATGCGGCGTTCTCAGGAAATTTTACTGGTTTAGAGCTGGAGGATGGTGGAGGACGTGGCACATCAGGGTCTCACTGGGAAAAAAGGCTTCTGATGAATGAGATTATGACTGGTTCTGTGGATACAAGATCTGTTGTTTCAAAAATGACATTAGCACTGTTAGAAGATAGTGGATGGTACAAGGCCAATTACAGTATGGCAGACAATCTTGAGTGGGGTCGCAACCAAGGTACTGAATTTGTAACATCCCCTTGCAATCTCTGGAAAGGAGCCTATCGTTGCAACACAACACAATATTCGGGCTGTACATATAACAGGGAGGCAGAGGGATACTGCCCCATCCTAACTTACAATGGAGACCTGCCTCAGTGGGCTCGGTATTTTCCGCAAGCTAATAAGGGTGGACAATCCTCATTGGCTGATTATTGCACTTACTTCGTTGCTTATTCCGATGGATCATGCACTGACACTAACGGTGCTCGAGCACCTGATAGAATGCTAGGTGAAATCAGAGGAAGTAACTCTAGGTGTATGGCATCATCATTAGTACGCACAGGGTTTGTACGAGGTTCTATGACCCAGGGAAATGGTTGTTATCAGCACAGATGTATCAACAATTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTGGAGCTGGTGGACCCATTCAGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATACTTTGAGCTCTGCAGCACAGACCCAGTAGTTGAGTCTGGTCAATGCCATAATTGGTGTAATTTCAATGGAGATTGTGTTGATGGAAGATGCCAATGCTTTCTTGGATTTCATGGTGATGATTGCAGTAGACCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGGTGTTCTGACTATGCGGGATACACATGCCAGAACAGCTCCATGCTCCTATCTAGTCTTTCAGTTTGCAAAAATGTACTGGGAAATGATGTTTCTGGACAGCATTGTGCACCCAGTGAACCTAGCATACTACAGCAGCTGGAAGAAGTGGTTATCATACCCAACTACCACCGATTATTCCCCGGTGGTGCTAGGAAATTATTTAATATATTTGGCAGCACCTACTGTGATGAGACTGCTAAACGACTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGGCTTCGAGTATGCCATTCTGCATGCCAATCTTATAATCTAGCATGTGGAGCTTCACTTGACTGCTCTGACCAAACCCTTTTTAGCAGTGAGGGGGATGTGGAAGGTCAATGCACCGGTTCTGGTGAGATGAAATTGTCATGGTTTAATCGTCTGCGAAGCAGTTTTTCTTTGAGAAACAGTTCCTTGAAAGGAATATCTGTAAGATATAGGCAGGTTTAG	2484	0.4561	MELMVRRTSCTLSRFHCELRFAVVVFEIILILAWAEVYNAKPHEHQLQWGGLERNTANIASHSCIHDQILEQRKRPGRKVYSITPQVYEPGLLKHLQHKGRALLDVSTSPRPLQDAKKPIRIYLNYDAVGHSPDRDCRKIGDIVKLGEPPVTSLGFPSCNPHGNPPIFGDCWYNCTSEDISGEDKKCRLRKALGQTAEWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVSDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRNQVTEQVMDEKLRRMVTRVVLPRVVMQSRYHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADNLEWGRNQGTEFVTSPCNLWKGAYRCNTTQYSGCTYNREAEGYCPILTYNGDLPQWARYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNGARAPDRMLGEIRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINNSLEVAVDGIWKVCPGAGGPIQFPGFNGELICPAYFELCSTDPVVESGQCHNWCNFNGDCVDGRCQCFLGFHGDDCSRPVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGNDVSGQHCAPSEPSILQQLEEVVIIPNYHRLFPGGARKLFNIFGSTYCDETAKRLACWISIQKCDKDGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSEGDVEGQCTGSGEMKLSWFNRLRSSFSLRNSSLKGISVRYRQV*	828

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1565	827	Gene3D	Leishmanolysin domain 4	501	596	-	-
	Apr5g1565	827	PANTHER	LEISHMANOLYSIN-LIKE PEPTIDASE	1	609	IPR001577	GO:0004222\|GO:0006508\|GO:0007155\|GO:0016020
	Apr5g1565	827	PANTHER	LEISHMANOLYSIN-LIKE PEPTIDASE	607	799	IPR001577	GO:0004222\|GO:0006508\|GO:0007155\|GO:0016020
	Apr5g1565	827	PANTHER	METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN	607	799	-	-
	Apr5g1565	827	PANTHER	METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN	1	609	-	-
	Apr5g1565	827	ProSitePatterns	EGF-like domain signature 2.	622	633	IPR000742	-
	Apr5g1565	827	SUPERFAMILY	Metalloproteases ("zincins"), catalytic domain	117	600	-	-
	Apr5g1565	827	PRINTS	Leishmanolysin (M8) metalloprotease family signature	247	276	IPR001577	GO:0004222\|GO:0006508\|GO:0007155\|GO:0016020
	Apr5g1565	827	PRINTS	Leishmanolysin (M8) metalloprotease family signature	400	429	IPR001577	GO:0004222\|GO:0006508\|GO:0007155\|GO:0016020
	Apr5g1565	827	Pfam	Leishmanolysin	173	598	IPR001577	GO:0004222\|GO:0006508\|GO:0007155\|GO:0016020
	Apr5g1565	827	Gene3D	Leishmanolysin , domain 2	312	437	-	-
	Apr5g1565	827	Gene3D	-	114	302	-	-
	Apr5g1565	827	Gene3D	Leishmanolysin domain 3	440	499	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1565	Apr-Chr5	19469161	19476798	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1565	K01404		-	gmx:100775874	1561.58

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1565	5	19469161	19476798	Apr5g1565	5	19469161	19476798	ECH