Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1562 ATGCTAACAACCACCGTCACCCATCGATTCAAAGAAGCCCCCGAATTCTACAACTCCCCAGACTGCGCTTCCATCACCGACAATTCCGACAACGACAGCTACATCTGTTCTGACGAAGCAGTACACGTGGCAATGACCCTGGACACCACATACATCAGAGGATCCATGGCCGCAATACTTTCGGTCCTCCAACACTCTTCTTGTCCGCAAAACATATTCTTCCACTTCCTCTGCTCCTCCAACGCGTCCCTCCTACGCGCCGCAATCTCCACATCATTCCCTTACCTCAAATTCCATCTCTACAACTTCGATGACTCCATAGTCTCGGGCCTCATCTCCACCTCCATTCGCTCCGCACTCGATTGCCCCCTCAACTACGCGCGCTCCTATTTGCCCAACCTCTTACCACTCTGCGTCCGGCGCGTGGTCTATTTGGACTCCGACCTCATCCTAGTCGACGACATTGCAAAACTCGCAGCTACCCCATTGGGACAAAAATCTGTGTTGGCAGCACCCGAATACTGCAACGCCAATTTCACTTCCTATTTTACCCCTACCTTCTGGTCCAACCCATCTCTTTCCCTCACTTTTGCAAACAGAAAGCCCTGTTATTTCAACACGGGGGTGATGGTGATCGATTTAGAACGGTGGCGAGAAGGGGATTACACGAAGAAGATTGAGGAGTGGATGGAACTTCAGAAGAGGATGAGAATCTACGACCTGGGTTCTTTGCCGCCATTTTTGCTTGTGTTTGCTGCGAACATTGCTCCGGTGGATCACAGGTGGAACCAGCACGGCCTCGGCGGTGATAACTTTCGTGGGCTCTGCAGAGATCTTCACCCTGGACCCGTTAGTCTCTTGCATTGGAGTGGCAAAGGTAAACCGTGGGTTCGATTGGACGCAAATAGGCCTTGTCCTTTGGATGCTCTTTGGGCACCCTATGATCTATTGCAAACTCCCTTTTCTCTCGATCCTTGA 978 0.5133 MLTTTVTHRFKEAPEFYNSPDCASITDNSDNDSYICSDEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFLCSSNASLLRAAISTSFPYLKFHLYNFDDSIVSGLISTSIRSALDCPLNYARSYLPNLLPLCVRRVVYLDSDLILVDDIAKLAATPLGQKSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFANRKPCYFNTGVMVIDLERWREGDYTKKIEEWMELQKRMRIYDLGSLPPFLLVFAANIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSLDP* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1562 325 Pfam Glycosyl transferase family 8 42 298 IPR002495 GO:0016757
Apr5g1562 325 PANTHER HEXOSYLTRANSFERASE 4 324 - -
Apr5g1562 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 41 316 IPR029044 -
Apr5g1562 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 42 305 IPR029044 -
Apr5g1562 325 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1562 Apr-Chr5 19455927 19460216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1562 8 323 Glycosyltransferase AT3G50760 74.295 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1562 K20893 - gmx:100802240 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1562 5 19455927 19460216 Apr5g1562 5 19455927 19460216 ECH