Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1550 ATGGCCATGGCCACCGCAATCCTCTCTCCTCAGAGCATCACCGGAGCCATCGTGAGCTCAACCAGCAAGACCAAGAAGAGAATGAACAAAGTAGTACCCATAAAAGGCCTAAATTCATATGGGGGACTAAAGGCTACCAATGGCGTTCTCTCGTTGGGGCTTCCTTTGAGCACTGAGAAGTGCTTTGCTAAGATCGTGAGCTCAGTGAAAGCCAGTGGGAAAGGAAAGGGAGGAGGGGGACTCTCGTCCACGGGCAATGCCGCGGGTGAGATATTCACCATTGCTGCTATCATGAATGGCCTTGTTCTCGTTGGGGTTGCAATTGGCTTCGTCCTCCTACGAATTGAAGCGTGGGTGGAGGAGTCCGAGACAGAGTGA 378 0.5238 MAMATAILSPQSITGAIVSSTSKTKKRMNKVVPIKGLNSYGGLKATNGVLSLGLPLSTEKCFAKIVSSVKASGKGKGGGGLSSTGNAAGEIFTIAAIMNGLVLVGVAIGFVLLRIEAWVEESETE* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1550 125 Hamap Cytochrome b6-f complex subunit 7 [petM]. 87 118 IPR012595 GO:0009512
Apr5g1550 125 Pfam PetM family of cytochrome b6f complex subunit 7 89 116 IPR012595 GO:0009512
Apr5g1550 125 SUPERFAMILY PetM subunit of the cytochrome b6f complex 88 120 - -
Apr5g1550 125 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1550 Apr-Chr5 19348276 19348996 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1550 - - gmx:100306520 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1550 5 19348276 19348996 Apr5g1550 5 19348276 19348996 ECH