Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1547 ATGTATTGTAAGTTTGGAAGCCATTGCCAGATATCAGGATGGAACTCCAAAATTTTCCCAACAAGGTCCATACAGGGAATCTGCAGAAACATGGATACACAACCTAGGCTACAAAGAAGGCTAGGAGGAAGCAGAGCTGTACTTTTTGTATATGCTATGGAAGGGCTAGAGAACATGGCTTTTGTTGCCAATGCAGTGAGCCTGGTAACTTACTTCTTTGGGTACATGAACTTCAACTTAACAAAATCCGCCACAACCCTCACCAACTTTATGGGAACTGCATTTTTACTAGCACTTGTTGGAGGATTAATCAGTGATACCTATCTTTCTAGGTTCAAGACGTGTGTTATGTTTGCTTGCATGGAATTGCTGGGATATGGAATTCTCACAGTTCAAGCACGTTTCCACCAATTAAGACCCATTCCATGCAAAGATTTAGCACCAACCCAAATGAGCCAATGTAAGGCTGCCGAAGGTGGCCAGGCTGCAGTGCTTTATATTGGTTTATATCTTGTTGCATTAGGAACCGGTGGTATTAAGGCAGCTTTACCAGCATTGGGTGCTGACCAGTTTGATGATAAAGATCCCAAGGAAGCAGCTCAACTATCAAGCTTTTTCAACTGGTTCTTGTTCAGCCTTACCATGGGATCCATAGTTGGTGTTACTTTCCTTGTTTGGATTGGTGCCAACCTAGGATGGGATTGGAGTTTCACTGTATGCACTTTAATAGTTATATTTGCAATTTTGTTCATATGCATGGGCAAGTCATTGTACCGAAACAATATCCCAAAGGGAAGCCCTCTAATTCGAATCATACAGGTGTTGGTTGCAGCTTTCAGAAACCGAAAACTTGAAATTCCAGAGAATGCAGACCAACTACACGAGATTCATGAAAAAGAAAGAGGGGACAACCATGAAATCCTTAAGAGGACAGATCAGTTCAGATTCTTGGACCGGGCAGCAATTGCTAGAAGCGGCGCAGGTGCTGAAGCAACATCAGGACCTTGGAGTCTCTGCACAGTAACACAAGTAGAAGAAACCAAGATCCTAATCCGCATGCTACCAATAATATTTAGCACCATATTTATGAACACATGTTTGGCTCAACTTCAGACTTTCTCTATTCAACAAAGCACCACCATGAACACCACAATCCTGGGGTTCAAAATGCCAGGACCCTCTCTCCCTGTCATCCCTCTATTGTTCATGTTTGTCCTAATACCTTTATACGACCGTTTATTTGTCCCACTTGCTCGAAGAATCACAGGGATTCCCACTGGAATTCGACACCTTCAGAGGATTGGAATTGGGTTGGTTCTCTCAGCTATTTCGATGGCAGTTGCTGGTTTTGTGGAGACACGCCGCAAGTCTGTGGCCATCCAACACAACATGGTAGATACCACACAACCTTTGCCAATAAGTGTGTTCTGGCTGGGTTACCAATATGCTATTTTTGGAGCTGCAGACATGTTTACCCTCATTGGCCTTCTCGAGTTTTTCTATGCAGAAAGTTCAGCTGGAATGAAGTCACTTGGCACAGCAATTTCTTGGAGTTCTGTGGCATTCGGTTACTTTACAAGCACAGTGGTAGTTGAGGTGGTTAACAAAGTTAGTGGTGGGTGGCTGGCAAGCAATAACTTGAATAGAGACAAGCTCAATTACTTTTACTGGTTACTGTCCGTGATAAGTGTAGTCAACTTTGGCTTTTACTTGGTTTGTTCTTCTTGGTATAGATACAAAACAGTGGAAGACAAGCATGGTGATTCAAAAGACAATGTTGATATCCCCAAGGTTTAG 1797 0.429 MYCKFGSHCQISGWNSKIFPTRSIQGICRNMDTQPRLQRRLGGSRAVLFVYAMEGLENMAFVANAVSLVTYFFGYMNFNLTKSATTLTNFMGTAFLLALVGGLISDTYLSRFKTCVMFACMELLGYGILTVQARFHQLRPIPCKDLAPTQMSQCKAAEGGQAAVLYIGLYLVALGTGGIKAALPALGADQFDDKDPKEAAQLSSFFNWFLFSLTMGSIVGVTFLVWIGANLGWDWSFTVCTLIVIFAILFICMGKSLYRNNIPKGSPLIRIIQVLVAAFRNRKLEIPENADQLHEIHEKERGDNHEILKRTDQFRFLDRAAIARSGAGAEATSGPWSLCTVTQVEETKILIRMLPIIFSTIFMNTCLAQLQTFSIQQSTTMNTTILGFKMPGPSLPVIPLLFMFVLIPLYDRLFVPLARRITGIPTGIRHLQRIGIGLVLSAISMAVAGFVETRRKSVAIQHNMVDTTQPLPISVFWLGYQYAIFGAADMFTLIGLLEFFYAESSAGMKSLGTAISWSSVAFGYFTSTVVVEVVNKVSGGWLASNNLNRDKLNYFYWLLSVISVVNFGFYLVCSSWYRYKTVEDKHGDSKDNVDIPKV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1547 598 Pfam POT family 112 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr5g1547 598 Gene3D MFS general substrate transporter like domains 22 586 IPR036259 -
Apr5g1547 598 SUPERFAMILY MFS general substrate transporter 47 585 IPR036259 -
Apr5g1547 598 PANTHER PEPTIDE/NITRATE TRANSPORTER 36 586 - -
Apr5g1547 598 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 36 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1547 Apr-Chr5 19333011 19336909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1547 37 585 Organic Solute Cotransporters AT1G69850 44.288 3.35e-157 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1547 K14638 - gmx:100805429 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1547 5 19333011 19336909 Apr5g1547 5 19333011 19336909 ECH