Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1546 ATGGATCTCCGTGAATCAATCAGCAACCAAACCGACGTTTCTCTGAGCATAGCCAAACTCTTGTTCTCGAAAGAAGGTTCCGACAAGAACCTCGTATTTTCGCCCCTGTCGCTCCATGTTGTGCTCAGCATCGTCGCTGCTGGCTCTGAGGGTCCTACACTCAATCAACTTCTCTCCTTTCTCCGATCTCAATCCACAGACCATCTCAACTCCTTCGCCTCTCAGCTCGTCTCCGTCGTCCTCTCCGACGGTGCTCCCGCCGGCGGGCCTCGCCTCTCTTTCGCAGATGGCGTGTGGATTGAACAGACTCTTTCTCTTCACCCTTCCTTCAAACAACTTGTCGAAACTGATTATAAGGCCACTCTGGCTTCCGTTGATTTCCAGACCAAGGCTGTTGAAGTGACCAATGAAGTTAATTCATGGTCTGAAAAAGAGACAAATGGCCTCGTTAAAGAGCTTCTTCCTGCTGGATCAGTGGACAGTTCAACCAGGCTCATCTTTGCAAATGCACTGTACTTTAAAGGAGCATGGAATGAGAAGTTTGATGCTTCAACAACTAAAGACTACGATTTTCACCTTCTTAATGGCAGCTTAGTCAAGGTTCCCTTCATGACAAGCAAGAAGGAGCAGTTCGTTAGGGCTTTTGATGGTTTCAAAGTCCTTGGCCTTCCCTATAAACAAGGCCAAGATAAGCGTCAATTCTCTATGTACATTTTTCTTCCAGATGAAAAAGATGGGTTGTCAGCTTTGGCTGAGAAGTTGGCTTCTGAATCTGGGTTCATGGAACGCAAGCTTCCTCATCAAAAAGTGAAAGTAGGAGATTTCAGGATCCCAAGATTCAATATTTCTTTTGGGTTTGAAGCATCTAATGTGCTGAAAGAGCTGGGAGTGGTTCTGCCTTTCGCTGGTGGATATTTGACAAAAATGGTGGACTCTCCTGTGGGACGAAACCTATACGTTTCCAACGTTTTCCACAAAACTTTTGTTCAAGTAAATGAAGAGGGCACTGAAGCAGCAGCGGCCACCGCTGCAACTGTGCGATTGAGGAGTGCGTCAATTATGACTGAAATAGACTTTGTTGCTGATCATCCGTTCTTGTTCCTCATCAGAGAAGACGTAACTGGAACAGTACTCTTTATTGGGCAGCTTCTCAATCCTGTTGCTGTTTGA 1170 0.4607 MDLRESISNQTDVSLSIAKLLFSKEGSDKNLVFSPLSLHVVLSIVAAGSEGPTLNQLLSFLRSQSTDHLNSFASQLVSVVLSDGAPAGGPRLSFADGVWIEQTLSLHPSFKQLVETDYKATLASVDFQTKAVEVTNEVNSWSEKETNGLVKELLPAGSVDSSTRLIFANALYFKGAWNEKFDASTTKDYDFHLLNGSLVKVPFMTSKKEQFVRAFDGFKVLGLPYKQGQDKRQFSMYIFLPDEKDGLSALAEKLASESGFMERKLPHQKVKVGDFRIPRFNISFGFEASNVLKELGVVLPFAGGYLTKMVDSPVGRNLYVSNVFHKTFVQVNEEGTEAAAATAATVRLRSASIMTEIDFVADHPFLFLIREDVTGTVLFIGQLLNPVAV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1546 389 CDD serpinP_plants 8 386 - -
Apr5g1546 389 SUPERFAMILY Serpins 6 386 IPR036186 -
Apr5g1546 389 Pfam Serpin (serine protease inhibitor) 10 386 IPR023796 -
Apr5g1546 389 SMART serpin2 15 386 IPR023796 -
Apr5g1546 389 PANTHER SERPIN-ZX-LIKE 14 388 - -
Apr5g1546 389 Gene3D - 177 381 IPR042185 -
Apr5g1546 389 Gene3D Antithrombin, subunit I, domain 2 28 333 IPR042178 -
Apr5g1546 389 ProSitePatterns Serpins signature. 359 369 IPR023795 -
Apr5g1546 389 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 14 388 IPR000215 GO:0004867|GO:0005615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1546 Apr-Chr5 19325451 19327806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1546 K13963 - gmx:100775287 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1546 5 19325451 19327806 Apr5g1546 5 19325451 19327806 ECH