Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1544 ATGGGTGCAGAGGCACAAATTTCCCGAAGCTTAATCAACAGAATCTATGCTCCATTGGCTAATGAATTTCATTTTGCAACTCCTCTCTCCTCCTTGCGAACAAATGAACTTGACCTTGTGCGAGGTGTTTTACGAATGCTGCAAGGGTTTTCCGGTTCTTTATTCTCTTGGGATAACAGTGGAAACCGTTTTCGTGCCAAGAGTGGAATATACGTTAGTCATCTCTCCCAGAATAGTCTCCACTCTCTTCTCAATCAATTTATCCACGCAGCAACTTGTCTCCAATTGGTAGATATTACACTCAATAGAGTTGAAACTGCGGTGCCAAAACCTCCTCCAACTTTGAAGGCTTTTGCGTCCTCTGCTTCCGCGTGGCTTAAGCGTTTACGGAATATTGCGTTGAAGGAGGAAGTGTCCACGAGCAATGCAGATGGCATAACCACTCCAACCTTGTTAGGATTAGCTAATTCTTTATCGAGTCTCTGCTCAGGGGCTGGGTTCCTATTGCGAATAGTTCATGAGGCCATCCCTGCGGTATACTTTGAGGTTGGTGCATCTGTACCGGCGGCAGAACTGGCTGTTCATGTGCTTGACTATCTTCATAAAAAGCTTGATGAAATGTGTCTTGTTGAAGGTGGTGAGGAGGAAGCTTATCAGATGGTGCTTTATATGTATTTTGGAAGCTTATTACCATATATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGAATTCTTAATGATCCTTCTGAAGAGATGTTCTTTTTTACTAATAAAGAAGTGTCAGTTGATGAGGCTGAGTTCTGGGAGAGGAGTTATTTATTAAGAATGCTACAGCATGTTAAGTTTGATTCAGAGTTCTCTTCCATGAATTATGCCAGTGATTCTGTGTCAGCATCAAATGACAAGAAGGAAATGGACAGAAGGGATTCCATCCCTTTGTCAAGTACAACTAAAGGAAAAGAGCAGAACACTAGAGGCCATCCAGCTTGTCCTTTTTTTATTAAGGATTTAGCTAAATCAATAGTCTCTGCTGGTAAATCTTTGCAGTTAATGTGTCATGTCCCCAATTCCTCAGCAGCATGTAGCAAGGGAAGTAATTGTGAGACTGGAAGTACCAAATATTTGAACGATGGTTTATATCCTTCTCAGAGATTGTCTGGGCTAACGTTGTCAGAAGTTTTTTCCGTATCACTTGCTGGACTTGTTGGTCATGGTGACCATGTTTTTAAGTACTTTTGGCAAAATGACTGGTACAAATCTGTATCTGTTTCTTCTGTTGTATCTCATGTAAATGAGGAAAGCACAGAGAATGACAATAATAATAAATCATCTCCTCCACCTTACTCAGAGAAGACTTGGTATAAGTTCTTGATCGATACATTATTTCTGAAAGGATCAACTGATTTGAAGCTAAAATACAAAGGCATAAACAGTGACACAAGAGACCTGAGAGGGGCCAGAGTTGTTCAAGATGAAGTGATTCTCTTGAGATCATATGTAGAAAATCCGGTTATTACTGTATGTCAAATGAACCTTGGAAAGAATGGGGATGCCTTAAAAACATTGAATTTGTCTCAGAAATTCTGCTTGCCTTCATTAAATGATGAGGGTTTAAGAAAGGCAATATTTGGTGGAGAAAGTACAGCATTTTCTGATAGCGAGGGAACAAACTATACTTTTGGCTTTCAGTTTGGTGAATCTGAATACCTTCGCTCACAGGATGAGAGAAATCTGTTAGGAATGTTGTTTCCTTTTCCCACTATTTTGCCTTTGTTTCAGAATGATCTTCCTGTGTCAGAGCTCTTGCCTTTTCAGAGGAACAGCAGTCTTCCTTCAAGAGTTCTTCGTTGGATGCAAAATGTTGACCTAAGAACTACTCCACTTCCACTAGTTATTATGCAGTACTGTCTAACTGTCTACATTCAGAAACAGGTAGAATATATTGGAGTGAATATGTTGTTAAAGTTGATGAACGAATGGAGGTTGATGGATGAGCTTGCAGTGTTGCGTGCTATATACTTGCTAGGTTCAGGTGATTTGCTGCAACACTTTTTGACTGTAATTTTCAACAAGTTGGATAAGGGTGAAACATGGGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCTGATTCATTGGTAGTGTCAATAACCAAAAGTCTTGTTGACAGTGATGAGGAAGCTAGCACATCTGGTGTTGTTTTGAGTACTCATAAGAGTCATATCAGTAGCTTTGGAATTAACGGCCTTGATATGCTCAAGTTCACGTATAAGGTCCCTTGGCCCCTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTGATGCGGTTCTTATTGAAGGTCAAGCGTGCAAAATTTGTGTTAGATAAAGTGCGGAGATGGATGTGGAAGGATAGGGGATCTATTACAAACGACCGAAAGCATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCTTGGCGTGAACTATGTGAAGGTATGACTGCAGCTAAATCACTGGATGAAGTCATTGAAGTCCATGAAGCTTACATTTTATCAATTCAGAGGCAGTGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTGATTGCCAGCCGCATTAACAGCATCCTTGGAATAGCTTTAGACTTTTATATCATACAACAGACATTAAGTAGTGGTGGAGCTGTTTCTGCAATCAAGGCAAGGTGTGAGATGGAAGTGGACCGGATAGAAAAACAGTTTGATGAGTGCATTGCTTTCTTACTCAGGGTCTTATCTTTCAAACTAAATGTTGGGCACTTCCCTCATTTGGCTGATTTGGTGACCCGAATTAACCACAACTATTTCTACATGTCCCCTAATGGAAATTTGATGACTGCCTCCGGTTCTGGAAGTGTTACTTCAAGGATGGGGAAGGCCCCTGGGTAG 3009 0.4068 MGAEAQISRSLINRIYAPLANEFHFATPLSSLRTNELDLVRGVLRMLQGFSGSLFSWDNSGNRFRAKSGIYVSHLSQNSLHSLLNQFIHAATCLQLVDITLNRVETAVPKPPPTLKAFASSASAWLKRLRNIALKEEVSTSNADGITTPTLLGLANSLSSLCSGAGFLLRIVHEAIPAVYFEVGASVPAAELAVHVLDYLHKKLDEMCLVEGGEEEAYQMVLYMYFGSLLPYIEGLDSWLFEGILNDPSEEMFFFTNKEVSVDEAEFWERSYLLRMLQHVKFDSEFSSMNYASDSVSASNDKKEMDRRDSIPLSSTTKGKEQNTRGHPACPFFIKDLAKSIVSAGKSLQLMCHVPNSSAACSKGSNCETGSTKYLNDGLYPSQRLSGLTLSEVFSVSLAGLVGHGDHVFKYFWQNDWYKSVSVSSVVSHVNEESTENDNNNKSSPPPYSEKTWYKFLIDTLFLKGSTDLKLKYKGINSDTRDLRGARVVQDEVILLRSYVENPVITVCQMNLGKNGDALKTLNLSQKFCLPSLNDEGLRKAIFGGESTAFSDSEGTNYTFGFQFGESEYLRSQDERNLLGMLFPFPTILPLFQNDLPVSELLPFQRNSSLPSRVLRWMQNVDLRTTPLPLVIMQYCLTVYIQKQVEYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGETWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKSLVDSDEEASTSGVVLSTHKSHISSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKDRGSITNDRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTAAKSLDEVIEVHEAYILSIQRQCFVVPDKLGALIASRINSILGIALDFYIIQQTLSSGGAVSAIKARCEMEVDRIEKQFDECIAFLLRVLSFKLNVGHFPHLADLVTRINHNYFYMSPNGNLMTASGSGSVTSRMGKAPG* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1544 1002 Gene3D - 662 976 IPR042241 -
Apr5g1544 1002 MobiDBLite consensus disorder prediction 297 325 - -
Apr5g1544 1002 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 998 - -
Apr5g1544 1002 Pfam Gamma tubulin complex component N-terminal 40 375 IPR041470 -
Apr5g1544 1002 MobiDBLite consensus disorder prediction 299 314 - -
Apr5g1544 1002 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 998 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Apr5g1544 1002 Pfam Gamma tubulin complex component C-terminal 662 977 IPR040457 GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1544 31 709 Glycosyltransferase AT1G20570 49.211 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1544 K16572 - gmx:100782299 1701.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1544 5 19307556 19317412 Apr5g1544 5 19307556 19317412 ECH