Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1538 ATGAACACAAGCGTCACGACAAGGCTGCAACATAGAAAAGCTCCAATTGCACATGAAAAAGCAGAGATGCGGGGAAGCTTGCAAGAGGGAGCAAAAACAGAGAATACAGTTAAAGGTGGAAAAACATCGAGCAAAGACAGAAAATTGGCTTTGCAACAAGATGTTGACAGGTTGAAGAAGAAGCTAAGGCGTGAGGAAAACATCCACAGGGCATTGGAGAGAGCTTTCAATAGGCCTTTGGGAGCTCTACCTCGTCTTCCTCCATATCTCCCTTCCCATACACTAGGACTTCTGGCCGAGGTAGCAGTACTGGAAGAAGAAATTGTTAGGCTTGAAGAACAGGTTGTGCATTTCAGACAGGACTTGTACCAGGAAGCTGTCTACATGTCATCCTCTAAGATGAAACTTGAGCATTCAGAATGTGTGAACAATGCAAGCTCAAATCATAGTGCCAAACTGGGTAAATTGAAGTCCCTTTCCCAGAGGATGGATAATGCTGCCACATCTGTAACGAGGACTACAACACCACTTCCAGAGGATAGAAGAGGAAAAGAGAATCAATCGTGCACTAATTCTTACAAGAGCAGCAAACAATCCATATGTAAAGGCCAAATTACAAAATCTCCAACTAAGAAACTTCCTATTGACAGTAAATCATTGAAAAAACGTTGGGATCCTCCAAAAAAGCAGCAAGAACTAAGGCTGAACAACCAGCCAACTGCAGAAGTAAGAAAGCATAGTCTACGCAAAACGCCACCAGGGGATGAAAGCCCAAATATAATCTCTGAAAATATTCTGAAGTGTTTATCAAGTATTCTCTTGAGAATGAGTACAGCAAAGAAACCGGCTTCTGCAGGTGATCTACCACCCTTATGGACTCCAAAATCTGAAAACTGCATTGAAGGACCAGAATCTTGGGATCCTTATGGTATCTGCTTGGAATTTGGAAAGGTAGATATTGTTCCATACAAGCAGTTACGTGCAATTGAAGCTAAATCATTCGATCCAAAACGAACTGCAAAATCTTTGATTTTACTGCGCCGGTTGAAACTTCTTCTGAGAAAACTAGCCCGTGTCAATTTTAAGAACCTCAACCACCAAGAGAAGCTTGCATTCTGGATCAACATCTACAACTCATGTATGATGAACGCATTCTTAGAAAATGACATACCAGACAGTCCTGATATGGTTGTCACGCTGATGCAGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACCATAGAACATTGCATTTTAAGACTTCCATATCACCGGAAATTTCTAAATTCTAAACAGACATTATCAAAGGGAGCGAAAAATCATGAAACTTATGGACTGGAATTGTCAGAACCCCTAGTGACATTTGCTCTCTCTTGTGGAACTTGGTCCTCTCCTGCAGTGAGAGTTTACACTGCATCTCAGGTTGAGAACGAACTTGAAATGGCCAAAAGAGAATATTTACAGGCTGCAGTTGGAATTTCAACATCGAAGTTTGTTATCCCAAAGTTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATATGCCTCCAATTACCAAGTGATGTGGGTAAAGAAGCCATTAAGTTCCTTGAGAAAAGAAAAACCGAGCCCCTCTCACAATTTGTACAGATTATGCCATATGAGTTCAATTTTAGATACTTGCTGTGCACATAG 1710 0.4129 MNTSVTTRLQHRKAPIAHEKAEMRGSLQEGAKTENTVKGGKTSSKDRKLALQQDVDRLKKKLRREENIHRALERAFNRPLGALPRLPPYLPSHTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEHSECVNNASSNHSAKLGKLKSLSQRMDNAATSVTRTTTPLPEDRRGKENQSCTNSYKSSKQSICKGQITKSPTKKLPIDSKSLKKRWDPPKKQQELRLNNQPTAEVRKHSLRKTPPGDESPNIISENILKCLSSILLRMSTAKKPASAGDLPPLWTPKSENCIEGPESWDPYGICLEFGKVDIVPYKQLRAIEAKSFDPKRTAKSLILLRRLKLLLRKLARVNFKNLNHQEKLAFWINIYNSCMMNAFLENDIPDSPDMVVTLMQKATINVGGHLLSATTIEHCILRLPYHRKFLNSKQTLSKGAKNHETYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEMAKREYLQAAVGISTSKFVIPKLLDWYLLDFAKDLESLLDWICLQLPSDVGKEAIKFLEKRKTEPLSQFVQIMPYEFNFRYLLCT* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1538 569 MobiDBLite consensus disorder prediction 12 27 - -
Apr5g1538 569 Pfam Protein of unknown function, DUF547 362 491 IPR006869 -
Apr5g1538 569 Coils Coil 94 121 - -
Apr5g1538 569 MobiDBLite consensus disorder prediction 160 256 - -
Apr5g1538 569 MobiDBLite consensus disorder prediction 160 176 - -
Apr5g1538 569 MobiDBLite consensus disorder prediction 1 47 - -
Apr5g1538 569 Coils Coil 48 75 - -
Apr5g1538 569 MobiDBLite consensus disorder prediction 188 213 - -
Apr5g1538 569 Pfam Leucine-zipper of ternary complex factor MIP1 44 125 IPR025757 -
Apr5g1538 569 PANTHER EXPRESSED PROTEIN 1 568 - -
Apr5g1538 569 MobiDBLite consensus disorder prediction 214 230 - -
Apr5g1538 569 PANTHER TRANSCRIPTION FACTOR 1 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1538 Apr-Chr5 19271961 19275577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1538 - - gmx:100807554 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1538 5 19271961 19275577 Apr5g1538 5 19271961 19275577 ECH