Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1537 ATGGCCCAGGTTTCTGTCTCTCCTCTTCCTTCTTCTGCAACTTCGCCTCTTCCACTACACCGCCGAATCTTTCTCCGTCTTCAACGAACCGCCACCGCTTCCGCCACCGACTCCGTTTCCACGTCCACTTCCTCTTCCACTTCTAATTTCAAGCCTAAAGTGGTTGTCACCAGAGAACGCGGCAAGAACGCCAAGCTTATCACCGCTCTGGCTAAACATGAAATCAATTGTTTGGAGCTTCCACTCATTGAGCACACGCGGGGACCTGATTTAGACAGGCTTCCATCTGTATTAAGTGATAATGCATTTGATTGGGTTGTCATAACTTCGCCTGAGGCAGGTTCAGTCTTTCTAGAAGCATGGAGAGCTTCGGGGATGCCTCATGTCAAAGTAGGCGTTGTTGGGGCAGGCACTGCAAGCATTTTCAAGGAAGCTTCACAGTCGTTAAGCCAATCACTTGATATTGCTTTTACACCATCGAAAGCAACAGGAAAGGTTTTGGCTACAGAGCTTCCTAAGGTTGGAAATAAATGCACAGTTCTGTATCCTGCTTCTGCAAAAGCTAGCAAGGAGATTGAGGAAGGGCTTTCAAATCGTGGATTTGAGGTTACTAGGATGAATACATATACAACGGTTCCAGTTCAACATGTTGACCATGTGGTTCTAAAGCAAGCACTTGCTGCTCCTGTTGTTACCGTAGCTTCACCATCTGCAATTCGTGCTTGGAAGATTCTTCTTTCAGATTCAGAGTGGAGCAATTCCATTGCATGCATTGGTGAGACAACTGCTGCAATGGCAAGAAGTTTAGGCTTCACAAATGTGTACTACCCAGCACAACCAGGCCTTGAAGGCTGGGTAGAAAGCATTATTGAAGCATTAGGATCCTATGATGAATTGTTGAAGTAA 906 0.4614 MAQVSVSPLPSSATSPLPLHRRIFLRLQRTATASATDSVSTSTSSSTSNFKPKVVVTRERGKNAKLITALAKHEINCLELPLIEHTRGPDLDRLPSVLSDNAFDWVVITSPEAGSVFLEAWRASGMPHVKVGVVGAGTASIFKEASQSLSQSLDIAFTPSKATGKVLATELPKVGNKCTVLYPASAKASKEIEEGLSNRGFEVTRMNTYTTVPVQHVDHVVLKQALAAPVVTVASPSAIRAWKILLSDSEWSNSIACIGETTAAMARSLGFTNVYYPAQPGLEGWVESIIEALGSYDELLK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1537 301 Gene3D - 97 203 IPR036108 GO:0004852|GO:0033014
Apr5g1537 301 CDD HemD 54 289 IPR003754 GO:0004852|GO:0033014
Apr5g1537 301 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 13 298 IPR039793 GO:0004852|GO:0006780
Apr5g1537 301 Coils Coil 297 301 - -
Apr5g1537 301 SUPERFAMILY HemD-like 53 294 IPR036108 GO:0004852|GO:0033014
Apr5g1537 301 Pfam Uroporphyrinogen-III synthase HemD 66 287 IPR003754 GO:0004852|GO:0033014
Apr5g1537 301 Gene3D - 204 293 IPR036108 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1537 K01719 - gmx:100808086 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1537 5 19255274 19262574 Apr5g1537 5 19255274 19262574 ECH