Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1535 ATGGTGTCCCTGTCAACGCTTCCTGGACTTCCTCCCAGTTCTCAATTTGTCTTGACAATGGGGCAGTATGAATCCTCACCTGACCGCTCTCCAGTTGACTCTCTGGATATAAAATATTTCAAAACATTTCCATTAACATTGAGGTTAGTAGTCTTAGTTATCGTTGTCGCTTGTGGAATATACATTAGCTCAATTTCTTTAGTGCAAAAAGGTATACACACTAGAACCAGATTGCTAGACATCTCTGTCATCAATCAGCCATGTCATCATCCTTCTAGTGTGGAAGAATGGGAACTGCCTTACTTGCATTATCCAGAACCAAAAACCTATAGCAGAAAGGAGTGTGCTTGCAATCCTGTTAGGTTCTTTTGCATCGTGTCAATGCAAAGATCCGGGAGTGGTTGGTTTGAAACATTCTTGAACAGTCACATAAATGTAAGTTCCAATGGAGAAATATTTTCAATAGGCAAAAGAAGGGCCAACGCTTCTTCAATTTTGAAGACAATGGATAAAGTATATAATCTTGATTGGTTCACTAGTGCTTCTAAGAATGAGTGCTCTGCAGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTAATGGAGTATCATACGGAAATTGTGGAATACTTTGAACGGAGACAAGTTTCTGCAATATTCCTATTCAGAAGGAATTTGCTTCGTAGAATAGTATCAGTGCTAGCAAATTCCTATGACAAAAGTGCCAAGCCCTTGAATGGAACCCACAAGTCTCACGTGCACTCTCCATTGGAGGCTAAAATTCTTGCCAATTATAGGCCACATATCAATGTCACGTTACTGATATCAGAGCTAAAGCTAACAGAGGAGACAGCTGCAAAAGCAATTGCATACTTCAAGAACACTCGCCATATTGTTCTCTACTACGAGGATCTTGTCAACAACCGCACTAAACTGAAGGATGTTCAAGAATTTCTAAGGGTGCCATACAGACAACTGGAGAGCCGTCAAGTGAGGATTCATACTGCCCCATTGTCAAGACAAATTGAGAACTGGGAGGAAGTCCAGGAAGCGTTGACAGGGACACCATACCAGCGGTTTCTCTCCAAAGACTAG 1095 0.4146 MVSLSTLPGLPPSSQFVLTMGQYESSPDRSPVDSLDIKYFKTFPLTLRLVVLVIVVACGIYISSISLVQKGIHTRTRLLDISVINQPCHHPSSVEEWELPYLHYPEPKTYSRKECACNPVRFFCIVSMQRSGSGWFETFLNSHINVSSNGEIFSIGKRRANASSILKTMDKVYNLDWFTSASKNECSAAVGFKWMLNQGLMEYHTEIVEYFERRQVSAIFLFRRNLLRRIVSVLANSYDKSAKPLNGTHKSHVHSPLEAKILANYRPHINVTLLISELKLTEETAAKAIAYFKNTRHIVLYYEDLVNNRTKLKDVQEFLRVPYRQLESRQVRIHTAPLSRQIENWEEVQEALTGTPYQRFLSKD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1535 364 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 33 364 - -
Apr5g1535 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 327 IPR027417 -
Apr5g1535 364 Gene3D - 120 352 IPR027417 -
Apr5g1535 364 PANTHER SULFOTRANSFERASE 33 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1535 Apr-Chr5 19228931 19235415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1535 - - aprc:113866277 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1535 5 19228931 19235415 Apr3g0156 3 2763569 2766590 ECH
Apr5g1535 5 19228931 19235415 Apr7g0928 7 16310637 16314332 ECH
Apr5g1535 5 19228931 19235415 Apr3g1676 3 32331658 32338361 ECH
Apr5g1535 5 19228931 19235415 Apr5g1535 5 19228931 19235415 ECH