Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1521 ATGGGTGCCTCTCACAGTCGCGAAGATCTGTTGGAAAGTTCAGATTCAGAAGGTGAAGAAGAAGAAGAAGCAAATTACGAAGACGCTAATGGAGGAAGCTCTGAACGAAGAGTCAAAACTCCTTCATCCCTCGATGATGTGGAGGCCAAACTCAGAGCTCTCAAACTCAAATACTCCTCAAAAACCTCCAACGCCGTCAATAACGCCGTTAAGCTCTACCTCCACGTCGGCGGAAACACCCCCAAAGCCAAATGGGTAACCTCCGATAAACTCACTTCTTTCTCTTTCGTCAAAACCAACCGAATCGACGGTGACAGCGACGACGACGACGACGATAACGAAGACGAAGAACAAGGTTTCTGGGTTCTTAAGGTCGGTTCCAAAGTTCGATCCAAAGTGTCTCTCGATATGCAACTGAAGACCTTCGCCGACCAGCGGCGCGTCGATTTCGTCGCGCGTGCGGTGTGGGCGATGAAGTTCTTCACTGGGCAAGATTACAGCGCCTTCGTGGAGCAGTTCCAGAACTGTTTGTTCGAGAACACGCACGGCTTTGAGGCCACGGAAGCGAACAAGCTTAAGATTTACGGCAAGGACTTCATTGGGTGGGCGAGACCTGAAGCTGCTGATGATTCCATGTGGGAAGATGCAGAGGATAGCTTCACGAAAAGCCCCGGTTCTGCTACGCCGGTGCGAGCGAACCAGGACTTGAGGGAAGAATTTGAAGAAGCTGCAAATGGTGGCATTCAGAGTTTGGCTTTGGGTGCTTTGGATAACAGTTTCTTGGTGAGTGATAATGGCATTCAGGTTGTGAAGAATTTCGCTCATGGGATTCATGGGAAAGGTGCATTTGTCCACTTTGGTGATGGGTATCAGAATGGAGGCTCTTCGACGGTGCATTCTACCCCCAAAAAGACGCTTCTTATGAGGGCTGAGACCAACATGCTTCTGATGAGTCCAATTGGTGGGGGAAAGCTTCATTCAACGGGGCTTCATCAGCTTGATATTGAAACTGGGAAGGTTGTGACTGAGTGGAAGTTTGGGAAGGATGGTACTGAGATTACGATGAGGGATATCACCAATGATAGTAAAGGTGCTCAATTGGATCCCTCTGGGTCCACTTTTCTAGGATTGGACGATAATAGGCTCTGTAGGTGGGATATGCGTGATCGCAATGGAATGGTTCAGAATCTGGCTGATTCTAATGATTTGAATACCCCTGTGTTGAATTGGGCACATGGGCATCAGTTCTCGAGGGGGACTAACTTTCAGTGCTTTGCCACCACTGGTGATGGTTCCATTGTTGTTGGGTCGTTGGATGGAAAGATTAGGCTCTATTCGGTTAACACTATGAGGCAGGCAAAGACGGCTTTTCCTGGCCTTGGATCTCCTGTTACTCATGTGGATGTTACTTTTGATGGCAAGTGGATTGTGGGCACAACAGATACCTACTTGATTCTTATTTGTACTGTCTTTGCTGACAAAGATGGAAAAATGAAAACTGGTTTTGCCGGTCGGATGGGAAATAGGATTGCTGCTCCGAGGTTGCTGAAGCTCACCCCTCTGGACTCACATTTAGCTGGAGCAAATAACAAATTCCGCAATGCTCAGTTTTCGTGGGTTACAGAGAATGGGAAGCAGGAGCGCCATATAGTAGCCACGGTGGGGAAATTCAGCGTGATATGGAACTTTCAACAAGTCAAGGATGGTTCTCACGAGTGCTACCGAAACCAACAGGGTCTAAAGAGCTGCTACTGCTACAAGATAGTCCTCAGGGATGATTCTATTGTTGACAGCCGATTTATGCATGACAAGTTTGCAGTCTCTGAGTCTCCTGAGGCTCCATTGGTTATAGCCACCCCAATGAAAGTCAGCTCATTCAGCATATCAAGCAAACGATGA 1899 0.4792 MGASHSREDLLESSDSEGEEEEEANYEDANGGSSERRVKTPSSLDDVEAKLRALKLKYSSKTSNAVNNAVKLYLHVGGNTPKAKWVTSDKLTSFSFVKTNRIDGDSDDDDDDNEDEEQGFWVLKVGSKVRSKVSLDMQLKTFADQRRVDFVARAVWAMKFFTGQDYSAFVEQFQNCLFENTHGFEATEANKLKIYGKDFIGWARPEAADDSMWEDAEDSFTKSPGSATPVRANQDLREEFEEAANGGIQSLALGALDNSFLVSDNGIQVVKNFAHGIHGKGAFVHFGDGYQNGGSSTVHSTPKKTLLMRAETNMLLMSPIGGGKLHSTGLHQLDIETGKVVTEWKFGKDGTEITMRDITNDSKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLADSNDLNTPVLNWAHGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSVNTMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDTYLILICTVFADKDGKMKTGFAGRMGNRIAAPRLLKLTPLDSHLAGANNKFRNAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCYCYKIVLRDDSIVDSRFMHDKFAVSESPEAPLVIATPMKVSSFSISSKR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1521 632 Gene3D - 235 566 IPR015943 GO:0005515
Apr5g1521 632 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 632 IPR040458 -
Apr5g1521 632 MobiDBLite consensus disorder prediction 13 28 - -
Apr5g1521 632 MobiDBLite consensus disorder prediction 29 44 - -
Apr5g1521 632 PANTHER DEM PROTEIN 1 632 - -
Apr5g1521 632 Coils Coil 44 64 - -
Apr5g1521 632 Pfam VID27 C-terminal WD40-like domain 257 575 IPR013863 -
Apr5g1521 632 MobiDBLite consensus disorder prediction 1 44 - -
Apr5g1521 632 SUPERFAMILY Putative isomerase YbhE 301 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1521 Apr-Chr5 19140390 19143927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1521 46 632 Acyl Lipid Metabolism Gene Families AT3G19240 68.687 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1521 - - gmx:100810233 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1521 5 19140390 19143927 Apr5g1521 5 19140390 19143927 ECH