Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1518 ATGCCGCCATTTTTGTCGACCTCAAAGGCACTTTGCTCCTTGGCATCGCGTAAGAGTGGAGTCAGTCATTTGATTAGGTCTAGCAAGAGCAAGAGCAGTGGGAAACTCTATGGGTGCAGATGCATTAATGCCATTGCCGGCAAGGCCACCAATCACATTCAGCCTTTCGGTTCTCGTACCGTTTTTTCTCCTTTCTTGGGAACACTGTGCAATAATAATTATTATAATGGCGTCCAATCGAGACAGTTTCTTGGATGTGGAGATGGTGAAGAAGGTGTTCTATCCAAAACTTACGAAGAGAGGCGCGTTTTGGGGTACTCTCCAGAGCAATTATTCAACGTTGTTGCAGCTGTTGACTTCTATCATGGTTTTGTTCCGTGGTGTCAAAGGTCGGAGATACTTAGGCACTATCCTGATGGATCATTTGATGCTGAGTTGGAAATTGGATTTAAATTCCTTGTTGAAAGTTATGTTTCTCATGTTGAATTGGACAGACCAAAGCGTATAAAGACAGCTGTGTCACAAAGTACTCTGTTTGACCATTTGATAAACCTATGGGAATTTAACCCTGGTCCAGTTCCGGGAAGTTGCAACCTTTATTTCCTGGTAGATTTTAAGTTTCAGTCTCCACTTTACAGACAGATTGCATCAATGTTCTTTAAGGAGGTAGCCTCTAGGATGGTTGGTTCATTTACTGAGCGTTGCCGTTTGATATATGGACCAGAAATGCGGGTCCTTGAAAACTCATATGGAGAAAGGGCATGA 765 0.4301 MPPFLSTSKALCSLASRKSGVSHLIRSSKSKSSGKLYGCRCINAIAGKATNHIQPFGSRTVFSPFLGTLCNNNYYNGVQSRQFLGCGDGEEGVLSKTYEERRVLGYSPEQLFNVVAAVDFYHGFVPWCQRSEILRHYPDGSFDAELEIGFKFLVESYVSHVELDRPKRIKTAVSQSTLFDHLINLWEFNPGPVPGSCNLYFLVDFKFQSPLYRQIASMFFKEVASRMVGSFTERCRLIYGPEMRVLENSYGERA* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1518 254 Gene3D - 95 240 IPR023393 -
Apr5g1518 254 SUPERFAMILY Bet v1-like 97 240 - -
Apr5g1518 254 Coils Coil 246 254 - -
Apr5g1518 254 CDD COQ10p_like 98 236 IPR044996 GO:0006744|GO:0045333|GO:0048039
Apr5g1518 254 Pfam Polyketide cyclase / dehydrase and lipid transport 105 231 IPR005031 -
Apr5g1518 254 PANTHER SPERM PROTEIN HOMOLOG 1 248 IPR044996 GO:0006744|GO:0045333|GO:0048039
Apr5g1518 254 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1518 Apr-Chr5 19127803 19132069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1518 K18588 - gmx:100778674 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1518 5 19127803 19132069 Apr5g1518 5 19127803 19132069 ECH