Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1493 ATGGGAGGTTGGGCTATAGCGGTGCATGGGGGCGCTGGTGTGGACCCAAATCTCCCACCCCAGCGTCAAGAGGAAGCCAAACAACTCCTTACCCGCTGTCTCAATCTTGGCATCTCTGCTCTTCGTTCCAATGCTTCTGCAATCGATGTCGTCGAACTTGTCGTAAGGGAACTGGAAACGGATCCTCTGTTCAACTCTGGGCGTGGATCTGCCCTAACAGAGAAGGGAACAGTGGAAATGGAGGCAAGCATCATGGACGGTACAAAGAGACGATGCGGCGCCGTTTCGGGCCTCACCACCGTGAAAAACCCCATCTCCCTCGCTCGCCTTGTCATGGACAAATCCCCCCATTCCTACCTCGCCTTTTCCGGCGCTGAAGAATTCGCCAGGCAACAGGGTGTGGAGGTTGTGGAGAACGAATACTTCATCACTCCCGATAACGTTGGTATGCTGAAACTGGCAAAGGAGGCAAACACAATCCTGTTCGACTATAGGATTCCCACATGCGGTGCAGTAGTTGAGAGTCCATTGCAAATGAATGGACTTCCAATTAGCGTGTACGCACCAGAAACGGTTGGGTGCGTGGTGGTGGACAGCGAGGGAAAGTGTGCGGCTGCCACGTCGACCGGAGGACTGATGAATAAAATGAGCGGTCGGATCGGTGACTCACCCCTGATAGGTGCTGGAACGTACGCGTGTGAGGTGTGTGGGGTCTCATGCACAGGTGAAGGTGAGGCTATCATACGTGGCACACTGGCGCGTGAGGTGGCAGCGGTCATGGAATACAAGGGCCTGGGCCTTCAACAGGCTGTGGACTTTGTCATCAAGCACCGTCTTGATGAAGGGATGGCAGGGCTCATTGCAGTGTCTAATACTGGCGAGGTTGCTTATGGTTTCAACTGTAATGGCATGTTCAGGGGTTGTGCTACTGAGGATGGGTTCATGGAAGTGGGAATCTGGGAATGA 966 0.5393 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLTRCLNLGISALRSNASAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEEFARQQGVEVVENEYFITPDNVGMLKLAKEANTILFDYRIPTCGAVVESPLQMNGLPISVYAPETVGCVVVDSEGKCAAATSTGGLMNKMSGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQQAVDFVIKHRLDEGMAGLIAVSNTGEVAYGFNCNGMFRGCATEDGFMEVGIWE* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1493 321 CDD Asparaginase_2 5 313 - -
Apr5g1493 321 Pfam Asparaginase 4 320 IPR000246 GO:0016787
Apr5g1493 321 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 321 - -
Apr5g1493 321 PANTHER L-ASPARAGINASE 1 321 IPR000246 GO:0016787
Apr5g1493 321 Gene3D (Glycosyl)asparaginase 191 321 - -
Apr5g1493 321 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 318 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1493 Apr-Chr5 18882480 18884485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1493 6 281 Miscellaneous Gene Families AT4G00590 27.393 2.81e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1493 K13051 - gmx:547703 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1493 5 18882480 18884485 Apr5g1493 5 18882480 18884485 ECH