Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1487 ATGGGGAGTTCCAAGACAATCACTGAGGTTACCGACAATTCGAATAGCAATAGCAGCAGCACCGCTCACAACCATATCTCCTTTCCCCCCTTTGCCGAAGGAGAAAAGGTCTTTGCCTACCACACTGCTTGTCTTTACGAAGCCAAGGTTCGGCAAGTTGAGTACAAGCACAAAGGTTGGAAGTTCTTCGTTCATTATCTCGGTTGGAAGAAAAGTTGGGATGAATGGGTTGGTATTGATCGTTTGATGAAACACACGGAGGAAAACATGCGCCAGAAACTTGCCCTTGATGAGAAACTTGGCAATGATAAAAATGCAAAACTCCCACGTGGATTGGTTAAATCCAAGACTACTAATGTAACAAGAGGCAGGAAACGGAAGAATGAATCTGTGATTAAGAGAAAACCTGTGGTTCATCCTGACAAGCTTGTCAACATTCAGATTCCTCCAACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTTGGCAAGGTACTCGTTAAACTTCCTCGAACTCCTAATGTGAATGACATATTGAAGAAGTATTTTGATTACAGATTGAAGAAATGTGGATCGATAGCTGATTCAGTTGAAGAAATTATGAAAGGATTGTGTTGTTACTTTGACAAAGCACTGCCAGTGATGCTCTTGTATAAGAATGAACGCCAACAGTATCATGAGGCTTGTCCTGCCAATATCTTTCCTTCTACTGTATACGGTGCTGAGCATTTGTTGCGTCTCTTTGTTAAGTTGCCCGAGTTATTGTCTCATGCTAGCATTGAAGAGGAGACATTGACAGAACTTCAGGCGCAATTACTGAACTTTCTCAGGTTCTTGCGAAAAAACCAGAACACGTTTTTCCTTTCTACCTATCATGTTGCAGAAGATATTGAGAACAGCTCCAACAAACAAGGTGACTAG 933 0.4126 MGSSKTITEVTDNSNSNSSSTAHNHISFPPFAEGEKVFAYHTACLYEAKVRQVEYKHKGWKFFVHYLGWKKSWDEWVGIDRLMKHTEENMRQKLALDEKLGNDKNAKLPRGLVKSKTTNVTRGRKRKNESVIKRKPVVHPDKLVNIQIPPTLKKQLVDDCEFITHLGKVLVKLPRTPNVNDILKKYFDYRLKKCGSIADSVEEIMKGLCCYFDKALPVMLLYKNERQQYHEACPANIFPSTVYGAEHLLRLFVKLPELLSHASIEEETLTELQAQLLNFLRFLRKNQNTFFLSTYHVAEDIENSSNKQGD* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1487 310 Pfam RNA binding activity-knot of a chromodomain 32 82 IPR025995 -
Apr5g1487 310 ProSiteProfiles MRG domain profile. 140 308 IPR026541 -
Apr5g1487 310 Pfam MRG 128 295 IPR026541 -
Apr5g1487 310 PIRSF EAF3_MRG15 25 308 IPR008676 GO:0005634|GO:0006325|GO:0006355
Apr5g1487 310 Gene3D - 14 112 - -
Apr5g1487 310 PANTHER CHROMATIN-BINDING PROTEIN 1 309 - -
Apr5g1487 310 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 1 309 IPR008676 GO:0005634|GO:0006325|GO:0006355
Apr5g1487 310 SUPERFAMILY Chromo domain-like 27 164 IPR016197 -
Apr5g1487 310 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g1487 310 CDD CBD_MSL3_like 35 91 - -
Apr5g1487 310 Gene3D MRG domain 140 308 IPR038217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1487 Apr-Chr5 18843474 18847180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1487 K11339 - gmx:100777259 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1487 5 18843474 18847180 Apr5g1487 5 18843474 18847180 ECH