Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1486 ATGAAGCGTCCACTTTCGTCCGCCGCCGGCGCCGACCGGAAGATGAAAAAGGTGAAAGCGGTGGAAAGCGATGACGAAGAGGGTAACGATGGGAGGATTGGTGGTGGCCTTGCCAATTTCGACGAGAATCTTCTGTTCGAGGTGTTGAAGCACGTGGACGCGAGGACGCTGGCCATGGCGGGTTGCGTAAACAAACAGTGGCATAAAACGGCACAGGATGAGAGACTCTGGGAACTGATCTGCACAAAGCAGTGGGCTAACACCGGGTGTGGTGAGCAACAGCTACGATCCGTGGTCCTTGCTCTTGGTGGCTTTCGTCGTCTTCACTCGCTTTACCTCTTGCCCCTTTCCAAGCCTCAAACATCTTCCTCGGCTTGGGGTCCCATATCGCAGGTGATTCGGTCGAAGCCGCTACCTCGTTTGGGGAAAGACGAGGTTCATCTCTCCCTTTCACTTCTCTCTATTCGCTACTATGAGAAGATGAATTGCAATAGAAGCAGATGA 504 0.5337 MKRPLSSAAGADRKMKKVKAVESDDEEGNDGRIGGGLANFDENLLFEVLKHVDARTLAMAGCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQTSSSAWGPISQVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNCNRSR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1486 167 MobiDBLite consensus disorder prediction 1 31 - -
Apr5g1486 167 Gene3D - 36 135 - -
Apr5g1486 167 SUPERFAMILY F-box domain 39 86 IPR036047 GO:0005515
Apr5g1486 167 MobiDBLite consensus disorder prediction 1 32 - -
Apr5g1486 167 Pfam F-box domain 42 78 IPR001810 GO:0005515
Apr5g1486 167 PANTHER F-BOX PROTEIN GID2-LIKE 8 163 - -
Apr5g1486 167 PANTHER F-BOX ONLY PROTEIN 48-RELATED 8 163 IPR045118 GO:0019005|GO:0031146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1486 Apr-Chr5 18838773 18840419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1486 K14495 - gmx:100527591 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1486 5 18838773 18840419 Apr5g1486 5 18838773 18840419 ECH