Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1476 ATGAAGTCCGAAATGAAGAAAAAAAGAGTGACCCCTATTCCCAAAACTCCTTATAACACCAACGATCATGTGAAAGAAGGGTCTAGGGATGAGCTTTGCATCAGCCCGAGCTGTTTCTTTTGCACCATGAGAGAACCAGATGCATCTCACAGAAGGGCTGAAATAGAGAGTTGCTTCAAAGAAATGCCTGAGGGAGAGAATCAAGAACATGTCTTGGTGCTGAGTGGACTATGGAACATCGCAATGAGCCAACCCAATGACCCAGAGTTTCCTTCCCTTGGCATATTCAAGTGCATGGCAAATCTAATCCACAAAGGTGTAAACGACAGGCACTGGCTTCTCACGAATCAAAACATATACATACCCTATTATGCAGCTCATATCATTGGCTCTTACACTATGAACAAGGAGGAGTTTGCTCAACTAGCTGTGCAATCAGGTGTCATACCCCCATTACTAGAGTTGCTTCGTGGCAAGATTAGTTGGGTTGAGCAAAGAGTTGCTGTTCGAGCACTTGGTCACTTGGCCAGTTACAAAAGTACCTTCGAATCAGTAGCACAGTGCGAACAAGAGGTGGTGAAACTGGCCTTGGACTTGGCTTCCACTTGCTTAGAAGTGGTCTATGTTGACTTCGTAGCTGTGAAGGATGTGAAGAAAAGACTCGAGTACCATAGAAACTTGCTAACTAGAGGGGTTGGCGATTTGGAAATGGAGAATCGCAAGGCAGAAGAATGGTGTAGTCAACTTCAGTGCTGGTCTCTTTATCTGCTGAATTGTTTTGCTTGCAAAGATAGGTCTCTGGATCTCATTTGCAAAACGGTGTTTCTGAAGGACTTGTGCGATATGTGGGGCGGGTTGATAAATCATACATCGCCAGCTGGGGTTGGATTGATTAGAATCTTGTGTTATAGTAAAATAGGAAGGAAAAGCATTGCTGAGTTACCAAAAGTTTTAATGGCTCTTGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTTGTTCTGCTTCTCAAGGACCCAGATACGGGGTACAAAGTTATTGATGTTGCCGCTTCATACCTCGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCAAACGTGGGTGAGACCATCACAAGGGTGCTCCTTTTAGATAGTAAAAAGTTAATATTCACCAACAGACAAAAAGTTGAAGCAACAATACAAGAGGTGGTAGATTTGAAGGTGGATAGGAGGAATAAGGAGAAGCTAATGTCTGAAGAGAAATTAGAGGAAACAAGGGTTTTGATGAGTTTGATAAAGCAACAAGCGAATCACATGTTCAGGTTGGGAAAGGTAGAAGAGGCTTTAGTGAAATATTCTGAAGCACTTGATGTTTGTCCTTTGAGGTTTAGAACAGAAAGAATGGTGCTTTATAGTAACAAAGCGCAGTGTAATCTGTTGCTTAAAAACGCGGATTCAGCCATCAGTGACTCAACGCGTGCTCTTTGTCTCTCCAACCCGGTAAACACACACGGCAAAAGCCTTTGGAGGAGATCACAAGCATATGACATGAAAGGCATGGCCAAAGAGAGCCTCATGGATTGCATAATGTTCATGAACGGTTGCATCAAGTCAAATGAGACCAAGCGTGTCAAGATTCCATACTACGCCGCCCGCATGATCAGCAAACAGATGGATGCCACGTGGATCTTCGCCACTGCTCGCTCAAAGGTGAAAAAAACAAAAGAGTTGAATCAAATTGGCGGGGATGAAGATGCGAACGAGGGCAACCATGAAGAGCGACCACCTGATCATAAGGCGCTGATGATGATGGTGATGGAAAAGAAAAACATTCTCATGCACGGTCTGTCAACCATTAGTGAAGAACCTTTTTACGCAAAAGAAGCTGGTAGGAGAAAGATGGAAAGGGCAAGAAGAAGATTAAAGAAAGGTGTTGTAGCTCAACCAACGTAA 1959 0.4324 MKSEMKKKRVTPIPKTPYNTNDHVKEGSRDELCISPSCFFCTMREPDASHRRAEIESCFKEMPEGENQEHVLVLSGLWNIAMSQPNDPEFPSLGIFKCMANLIHKGVNDRHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQLAVQSGVIPPLLELLRGKISWVEQRVAVRALGHLASYKSTFESVAQCEQEVVKLALDLASTCLEVVYVDFVAVKDVKKRLEYHRNLLTRGVGDLEMENRKAEEWCSQLQCWSLYLLNCFACKDRSLDLICKTVFLKDLCDMWGGLINHTSPAGVGLIRILCYSKIGRKSIAELPKVLMALGNLSRSSDDWQYIGIDCLVLLLKDPDTGYKVIDVAASYLVDLIELRSLGDKSNVGETITRVLLLDSKKLIFTNRQKVEATIQEVVDLKVDRRNKEKLMSEEKLEETRVLMSLIKQQANHMFRLGKVEEALVKYSEALDVCPLRFRTERMVLYSNKAQCNLLLKNADSAISDSTRALCLSNPVNTHGKSLWRRSQAYDMKGMAKESLMDCIMFMNGCIKSNETKRVKIPYYAARMISKQMDATWIFATARSKVKKTKELNQIGGDEDANEGNHEERPPDHKALMMMVMEKKNILMHGLSTISEEPFYAKEAGRRKMERARRRLKKGVVAQPT* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1476 652 MobiDBLite consensus disorder prediction 1 24 - -
Apr5g1476 652 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 11 641 - -
Apr5g1476 652 SMART arm_5 136 177 IPR000225 GO:0005515
Apr5g1476 652 Gene3D - 94 374 IPR011989 -
Apr5g1476 652 Gene3D Tetratricopeptide repeat domain 391 547 IPR011990 GO:0005515
Apr5g1476 652 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 11 641 - -
Apr5g1476 652 SUPERFAMILY ARM repeat 113 353 IPR016024 -
Apr5g1476 652 MobiDBLite consensus disorder prediction 577 597 - -
Apr5g1476 652 SUPERFAMILY TPR-like 433 530 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1476 Apr-Chr5 18776033 18778309 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1476 - - gmx:100777591 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1476 5 18776033 18778309 Apr5g1476 5 18776033 18778309 ECH