Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1472 ATGAAGGAAGCAGAAGAGCAACTATGCGAGGCCGCCAGAAACGGTGACACGGAGCAGGTGAAAGCTCTCATAGATTCCGGCGCCGACGTCACTCATTTCGACGGCGAAGGCCTCAATCCTCTGATGCACGCTGCAAAGCACGGCCATGCACCCGTCCTCAACGTTCTCCTATCCGCCGGCGCTCCCTGGAACGCTCTTTCTCCCTCCAACCTCTCCGCGGGTGACTACGCCATGCAAGAAGGTCACCAAGAAGCCGTCGAACTTCTCCTTAATTCCGGGATTCAGGCTGAGCTGATTTTGGGAACAATTGCGAGAAAAGAAAATAAGAATGTTAATTCGGGTCATGATTATTTGGAAGATAGGGTTAGTTTTAGTGAAGATAAGCTTATGGACTCTGATAGCAAAGCTGTGATGATGGCGTGGGAGAAGCCATTGATGGAGGCACACGCTAAAGCTGTTTGTTCTGGAGGTGGTCACGTACTGAATATTGGGTTTGGAATGGGTCTTGTTGATACAGCAATTCAGCAGTATTCACCTGCGTCTCACACCATTGTTGAGGCTCATCCAGATGTCTATCAACGCATGCTTCGCTCTGGTTGGGATCAGAAGGAAAATGTGAAGATAGTTTTTGGCCGCTGGCAAGATGTTCTGTCTCAGCTTGAAACATATGATGGAATATTCTTCGACACTTATGGGGAGTACTATGAAGATTTGAGGGAGTTTCACCAGCATCTTCCGGCTCTGTTGAAGCCCGGTGGTATCTACTCGTACTTCAATGGCCTTTGCGGCAGTAATGCGTTTTTTCATGTTGTTTACTGTCACTTGGTGTCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCATTGCCTGTTAAGGATTGTTTGGGAGAACAAGTTTGGGAAGATGTGAAACACAGATATTGGCAGCTTGATACTTACTACCTTCCTGTCTGTCAGTCTGCAGAGGAGGACTCGCAGTGA 990 0.4768 MKEAEEQLCEAARNGDTEQVKALIDSGADVTHFDGEGLNPLMHAAKHGHAPVLNVLLSAGAPWNALSPSNLSAGDYAMQEGHQEAVELLLNSGIQAELILGTIARKENKNVNSGHDYLEDRVSFSEDKLMDSDSKAVMMAWEKPLMEAHAKAVCSGGGHVLNIGFGMGLVDTAIQQYSPASHTIVEAHPDVYQRMLRSGWDQKENVKIVFGRWQDVLSQLETYDGIFFDTYGEYYEDLREFHQHLPALLKPGGIYSYFNGLCGSNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEQVWEDVKHRYWQLDTYYLPVCQSAEEDSQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1472 329 Gene3D Vaccinia Virus protein VP39 108 323 IPR029063 -
Apr5g1472 329 ProSiteProfiles Ankyrin repeat region circular profile. 36 61 - -
Apr5g1472 329 SUPERFAMILY Ankyrin repeat 8 95 IPR036770 -
Apr5g1472 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 321 IPR029063 -
Apr5g1472 329 Gene3D - 1 107 IPR036770 -
Apr5g1472 329 SMART ANK_2a 3 32 IPR002110 GO:0005515
Apr5g1472 329 SMART ANK_2a 36 65 IPR002110 GO:0005515
Apr5g1472 329 SMART ANK_2a 69 98 IPR002110 GO:0005515
Apr5g1472 329 CDD AdoMet_MTases 160 255 - -
Apr5g1472 329 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 22 33 IPR001969 GO:0004190|GO:0006508
Apr5g1472 329 ProSiteProfiles Ankyrin repeat profile. 3 35 IPR002110 GO:0005515
Apr5g1472 329 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 110 329 IPR026480 -
Apr5g1472 329 PIRSF Rmt2 1 114 IPR017408 GO:0016274
Apr5g1472 329 PIRSF Rmt2 104 325 IPR017408 GO:0016274
Apr5g1472 329 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 1 323 - -
Apr5g1472 329 Pfam Ankyrin repeats (3 copies) 8 96 IPR002110 GO:0005515
Apr5g1472 329 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1472 K18477 - gmx:100527621 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1472 5 18745989 18747720 Apr5g1472 5 18745989 18747720 ECH