Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1464 ATGTCCAATCGATCTGGTCAAGGTAGGCAAGACAACAATAACAAGGGTTTCCCAAAACCCCACAAAAAATTCGTCCCTAAAAATCCCAATCAAACCCCAACCCTCTCTACCTCTCTTAGAGAAAGACAACAATCTGCTTCTGCTTCTGTTAGCACTACCAACAGAGGCTATGGAAATTTCGTTAAATACTTGCCACAAGACGAGGCTGTGGCTGCTGGTCTCGGCGCCGAGGATGGAGGATTGGATCCTCTTGAATCTCAGACAGTTGTCGATCTCTTGAATTCACACTTATCTCGCCTCCTCAAACTCAAACCCAAGGAATTCTGGAAACAAGTGGCCACTGATACCTCTCTGCATGAATTTCTGGATAGCTTCTTACAGTTTAGGAGCAGGTGGTATGATTTCCCTCATCGTGGGGTTAAAGGGATTGTTGCAGGTGTTATTGTTGGAGAGCGCGATTTGAGTCGCCGCGTTTTCATGCTGTTGTATCGCATGTCTTCCAATAAAGACCCTGGTGCTCGGCCTGCCGATACACTCAGTTTGAGAGACCATGGAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCAAAATTGTTAGACATATGTGCCATATACTATCATGAAAATGAAGAACTAACAAGATCACTGGTTGGAAATTCTTTGGATGCTCAGCCTTGGATCCATAATAGTCTGACTTCAGTAATATCCCATTTTCTAGGAATTGTCAACACAATGCATGAACGTTGTAGTTCATCATTGGAGGTTTTATTTTCTTCTGGAAATCCCGATAATCATAGTGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTCATAAATGATGCAATTGTATCGATGGATGCTTTTGTTAGTGCATACAAACCAGCAGCTATTTTCTTCTCTTGTCCAGTTGAAATGAGTTATGGGAATGAAGAACTGCTGAGCCTCCTTGCCAGATTATATGATTCACTAATTCCATCCTTGCATAAGGGATTCTGTGTCATTCTTGCTGACAAACAAGATGGAACAGTGTCTAATATCTTAGTAAGTTTGAAGATGTTAAGAATGAGATTGGTGAAGTTAGGATGGCAATTATTGCACTTGTGCTATCTAAGTGATGAAGTGTTCAAAGATGGGATCCCTTTTCCAGCTGCCACAAAAATGTTTCCTGCCAATGTAGAGGACCCCGTCATCAGAGCAGATATTCTGGTTCAAACATTTAGAGAGATCGATTCAATATCATTACATATTCTGGAAAGGCATCAGAAGGAAACATTTCTTCAAGCTGTTGAAAGAAATTTCAATATACTAAGCAAGATTGAAAGATTAAAGCATAATGGATGGGTATTTGTTGATGAGGAGCAGTTTCAATATATAAATGGGATTTTGTGTTCTCCACAAGAGATTTATAAGGTGCCATATTCTGCAATAACCCCTGTGCCGAACAAAACATTGCAGATGGATGAAGATGCTGCAATTTCTGAGTCAAAAATCAGTCAAATTAGGGACCTGTTCCCTGATTATGGTAAAGGGTTTTTAGCTGCGTGTCTTGATGTTTATGATCAGAATCCTGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGCGCCTGGACACTTCACTAGAGACAGTGCCACTAGCCAAGTCTACCTCTGTGGGGAGGAATGACAAAGGAAAAGGCAAATTAATTGATTCTACATCACCATCCTCAAATACAGAAGTTGTTATTGGTAAGCAACAGACAGAGGGACCGCCTATGTCATCCTCTGCTTCACTAGGAAAATTTGTGAGGAAAACTAAAGCTGATTTGCCGGATCTCAGTATTCTGGATAAGAAGGGCGAGAAAGATATATCAAAAACTGCTTTGCTTTTACAATATGAATATGAAGATGAGTATGATGACTCATTTGATGACTTGGGTCTAAGCGTAGCAGACTCTGGAGTAGAAGAAAATGAGATATTGCGTGATGAAATAAATGCAAAGTTTGGGAGTTCGTGGGCAACTGAGGCTGGAAACTCGGGCCAAAATGCCCATGCCACTAATTCAAAATGGGGTTCAAGGAAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGACTGGTGCAATTGCAGTGGCAAACTCTGATGAAGCTTCCCTAATTACTCAAGCTCAGAAAGAATTAATACATGGCCTGGGACGTGGTGGCAACCTTCCTCTCGGTGCGGTAAAGAAGTTGACAGATTCCTACAACGAGGATGATAACCAATTCCAGGTTACTGAAACAGAAGGGAGAGGAATTTCGGGTAATTCTAGAGGCAGGGGAAGGAAGGAATGGGGTAAACAAATTTCACCTCAGCAGCAGCAGCAGGAGAAACAATCTGATGATGCTGAGGGGGGTGGGAAGGAGCATATCTCAAATCATAGGGGAAGAGGGAGAGGGAGAGGGAGGGGAGGAGGCAGAAATTATTACCAGAAGGACCGAGCCATGAAGAAGCATTTCTCTGGACTCGGTGGTTATTAA 2544 0.4206 MSNRSGQGRQDNNNKGFPKPHKKFVPKNPNQTPTLSTSLRERQQSASASVSTTNRGYGNFVKYLPQDEAVAAGLGAEDGGLDPLESQTVVDLLNSHLSRLLKLKPKEFWKQVATDTSLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGERDLSRRVFMLLYRMSSNKDPGARPADTLSLRDHGVLLQEKKLLELPKLLDICAIYYHENEELTRSLVGNSLDAQPWIHNSLTSVISHFLGIVNTMHERCSSSLEVLFSSGNPDNHSAAFLQADLLEVMDFINDAIVSMDAFVSAYKPAAIFFSCPVEMSYGNEELLSLLARLYDSLIPSLHKGFCVILADKQDGTVSNILVSLKMLRMRLVKLGWQLLHLCYLSDEVFKDGIPFPAATKMFPANVEDPVIRADILVQTFREIDSISLHILERHQKETFLQAVERNFNILSKIERLKHNGWVFVDEEQFQYINGILCSPQEIYKVPYSAITPVPNKTLQMDEDAAISESKISQIRDLFPDYGKGFLAACLDVYDQNPEEVIQRILEGTLHEDLQRLDTSLETVPLAKSTSVGRNDKGKGKLIDSTSPSSNTEVVIGKQQTEGPPMSSSASLGKFVRKTKADLPDLSILDKKGEKDISKTALLLQYEYEDEYDDSFDDLGLSVADSGVEENEILRDEINAKFGSSWATEAGNSGQNAHATNSKWGSRKKPQYYVKDGKNYSYKVTGAIAVANSDEASLITQAQKELIHGLGRGGNLPLGAVKKLTDSYNEDDNQFQVTETEGRGISGNSRGRGRKEWGKQISPQQQQQEKQSDDAEGGGKEHISNHRGRGRGRGRGGGRNYYQKDRAMKKHFSGLGGY* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1464 847 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 11 845 - -
Apr5g1464 847 MobiDBLite consensus disorder prediction 1 52 - -
Apr5g1464 847 ProSiteProfiles CUE domain profile. 496 539 IPR003892 GO:0043130
Apr5g1464 847 SMART cue_7 496 538 IPR003892 GO:0043130
Apr5g1464 847 MobiDBLite consensus disorder prediction 27 52 - -
Apr5g1464 847 MobiDBLite consensus disorder prediction 761 847 - -
Apr5g1464 847 MobiDBLite consensus disorder prediction 557 600 - -
Apr5g1464 847 CDD CUE_ASCC2 498 537 IPR041800 -
Apr5g1464 847 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 11 845 - -
Apr5g1464 847 MobiDBLite consensus disorder prediction 571 600 - -
Apr5g1464 847 Gene3D - 497 539 - -
Apr5g1464 847 Pfam CUE domain 498 538 IPR003892 GO:0043130
Apr5g1464 847 SUPERFAMILY UBA-like 498 553 IPR009060 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1464 K18667 - gmx:100778129 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1464 5 18683341 18690934 Apr5g1464 5 18683341 18690934 ECH