Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1450 ATGTTCCTTTGTACTCGCATTGCAGAGATGATACGTGGCGCATATGAAGGGTTGATTGCTACACCTGAAAAGATTAATGATTTCCTAGATGGTGAAGATGATAGAGTATGTTCAAAGTTTCGGAAGGGAGTGAAAATATGGAAAAAATTAAAATATCAGCTTGTAGAATACAATTCACTGCCAGCCTACTTAAGGGACAATGAGTTCATATTGGACTATTATCGAGCAGAGTGGCCATTGAAGCAGATTTTCCTTAGCATTTTCTCAATTCATAATGAGACACTTAATGTTTGGACGCATTTGATTGGATTCTTCCTTTTCCTCTTTCTCACCATATACACAGCTGTGAGAGCTCCAGTGGTTGTGGATTTCGATTCCATTCAACATTTGTCTGAAATAATAGGGAAAGCTGATTTGAATAAGATTCATTTAGAGCTCTTGAAATGCCTGCCTTCACTGCCCAACATGCCTGATCTTGTCAAATTTAAAAACGAGTTGAGTGCATCTCTTTATTCTTTTGACTACTCCTCATTCTCAGGTTGGACTTTTGTGCAACTTCTCACCAATTGCCTTCCTGAGCAATTTTCCCTAGTAAGTTCCTGTTCCTCTCACCAATTGCTTGAACTAAGATATGACACGGTGAATGTGGTAGTATCCCCCTTCATGGTACAACCGATTACAAGGTGGCCTTTTTATGCCTTCTTAGGTGGGGCCATGTTCTGCTTGCTAGCCAGCAGTGCATGTCACCTCCTTGCTTGCCACTCACAGCGCCTCTCCTACATCATGCTCAGAATTGACTATGCTGGGATTGCTGCATTGATAGCAACATCGTTTTACCCTCCAGTGTATTACTCATTTATGTGCAACCCTTTTTTTTGCTTCCTCTACTTGGGCTTCATAACATTAATGGGAATAGCTACAATTATCTTTTCTCTTCTCCCATTTTTCCAAAAGTCTGAGTTCAGGAAGTACCGTGCATCCCTCTTCTTTTTGATGGGATTTTCGGGTGTGGCACCCATAATACATAAGCTGATATTGCACAAGCATCAACCTGAGGCATTGCAAACTACTGGTTATGAGATTCTAATGGGAGTTCTTTACGGTTTGGGAGCTCTAATTTATGTGACAAGGATACCAGAGAGGTGGATGCCTGGCAAGTTTGACATTGCTGGCCACAGTCACCAACTTTTTCATATCTTGGTTGTGGCTGGGGCTTACACACACTATCATGATGGGTTAATCTACTTAAGATGGAGAGATTTTCAAGGTTGTTAG 1275 0.4118 MFLCTRIAEMIRGAYEGLIATPEKINDFLDGEDDRVCSKFRKGVKIWKKLKYQLVEYNSLPAYLRDNEFILDYYRAEWPLKQIFLSIFSIHNETLNVWTHLIGFFLFLFLTIYTAVRAPVVVDFDSIQHLSEIIGKADLNKIHLELLKCLPSLPNMPDLVKFKNELSASLYSFDYSSFSGWTFVQLLTNCLPEQFSLVSSCSSHQLLELRYDTVNVVVSPFMVQPITRWPFYAFLGGAMFCLLASSACHLLACHSQRLSYIMLRIDYAGIAALIATSFYPPVYYSFMCNPFFCFLYLGFITLMGIATIIFSLLPFFQKSEFRKYRASLFFLMGFSGVAPIIHKLILHKHQPEALQTTGYEILMGVLYGLGALIYVTRIPERWMPGKFDIAGHSHQLFHILVVAGAYTHYHDGLIYLRWRDFQGC* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1450 424 PANTHER HEMOLYSIN-III-LIKE PROTEIN 10 424 - -
Apr5g1450 424 Pfam Haemolysin-III related 88 409 IPR004254 GO:0016021
Apr5g1450 424 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 10 424 IPR004254 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1450 Apr-Chr5 18592067 18593706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1450 K07297 - gmx:100800851 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1450 5 18592067 18593706 Apr5g1450 5 18592067 18593706 ECH