Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1446 ATGAAGGAACACACAGTGACAGTGGTTGTGATGCTGTCATTGCTTTGCACGTGTGGAGCAATTAGCACTAGCGGCAACCTGCATCCGTTGATTCTAGTACCTGGTAATGGAGGGAACCAACTAGAAGCCAGATTGACGCATGAGTACAAGCCCTCTAGTTTTATTTGCGAATCATGGTACCCTCTTATCAAGCAGAAGAATGGATGGTTCAGACTATGGTTTGATTCCAGCGTTCTACTCGCCCCTTTCACTCAATGCTTTGCAGACCGCATGATGCTTCACTACCACCCTCAACTCGATGATTACTTCAATACCCCTGGGGTTCAGACTCGGGTCCCTCACTTTGGTTCCACCCGCTCCCTTCTTTATCTCAATCCTCGTTTGAAGCTTATCACCGGATACATGGCACCCTTGGTAGATTCATTACAAAAGCTTGGTTATACCGATGGTGAGACTCTGTTTGGAGCACCCTATGATTTTCGATATGGTCTAGCGGCCGAAGGTCACCCCTCAAAAGTGGGCACCGAGTTCCTGAAAGACCTTAAGAATTTGATAGAAGAAGCAAGCACTTCCAATGGTGGGAAGCCAGTGATACTTCTCTCCCACAGCTTAGGAGGCCTATTTGTCCTACAACTCCTGAATCGAAACCCCCCCTCTTGGCGCAACAAATTCATCAAACACTTCATAGCTCTTTCAGCTCCATGGGGTGGTGCTGTAGACGAAATGTTCACCTTTGCATCTGGTAACACTCTTGGAGTTCCCCTAGTGGACCCTTTGATAGTGAGGGGTGAACAGAGAAGCTCTGAGAGCAACCTATGGCTTTTGCCCAACCCCATGATTTTTGGTCCTCAAAACCCAATAGTGATCACTCCAAATAAGAGCTATTCAGCGCATGATATGGCTGATTTTCTCAAAGACATTGGTTATCCTGAAGGGGTGTATCCTTATGAAACTCGCATTCTACCCTTGATAGGGAACATTCAAGCACCAGAAGTGCCTATAACTTGTATTGTAGGGACGGGCGTGAAAACCTTGGAGATTTTGCTTTACAGAAACGGTGACTTTGATGAACGACCCGAAATTTCTTATGGTGATGGTGATGGAACGGTGAACAATGTGAGCTTGTTGGCGCTTCAGTCACTATGGAAAGATGAGAGAAATCAATACCTCAAAGTGATCAAGATCGGTGGGGTGTCGCATGCTTCAATACTTAAAGATGAAGTTGCTCTTGATGAAATAATAGGCGAGATTAGTAGAATTCATTCTCATGCTGAGCTTGGTTTAAGCAATGTTTATTCGGGATAA 1305 0.4544 MKEHTVTVVVMLSLLCTCGAISTSGNLHPLILVPGNGGNQLEARLTHEYKPSSFICESWYPLIKQKNGWFRLWFDSSVLLAPFTQCFADRMMLHYHPQLDDYFNTPGVQTRVPHFGSTRSLLYLNPRLKLITGYMAPLVDSLQKLGYTDGETLFGAPYDFRYGLAAEGHPSKVGTEFLKDLKNLIEEASTSNGGKPVILLSHSLGGLFVLQLLNRNPPSWRNKFIKHFIALSAPWGGAVDEMFTFASGNTLGVPLVDPLIVRGEQRSSESNLWLLPNPMIFGPQNPIVITPNKSYSAHDMADFLKDIGYPEGVYPYETRILPLIGNIQAPEVPITCIVGTGVKTLEILLYRNGDFDERPEISYGDGDGTVNNVSLLALQSLWKDERNQYLKVIKIGGVSHASILKDEVALDEIIGEISRIHSHAELGLSNVYSG* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1446 434 Pfam Lecithin:cholesterol acyltransferase 70 306 IPR003386 GO:0006629|GO:0008374
Apr5g1446 434 Gene3D alpha/beta hydrolase 353 418 IPR029058 -
Apr5g1446 434 SUPERFAMILY alpha/beta-Hydrolases 24 410 IPR029058 -
Apr5g1446 434 Gene3D alpha/beta hydrolase 77 269 IPR029058 -
Apr5g1446 434 PANTHER LECITHIN:CHOLESTEROL ACYLTRANSFERASE FAMILY PROTEIN, EXPRESSED 22 419 - -
Apr5g1446 434 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 22 419 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1446 6 421 Acyl Lipid Metabolism Gene Families AT1G27480 60.382 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1446 - - gmx:100804027 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1446 5 18542108 18544057 Apr5g1446 5 18542108 18544057 ECH