Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1445 ATGTCATGGCTCGCTCGTTCCCTTGCAAACTCTCTCCGACTCGATGCCGATGGAGACGTTGAAAACGACGTCGTACTCGATCCACCTACTTCACGAGACAATGCAATTCGATCAAAAATACATCAGGAAGAAGAAGAACAAAATGAAGATCAAGAAACGCAAGGACGTGCTGGAGTCAGAGAGGACCTCAACGAAATCAAGCAAACCCTAACCCGCCAATTTTGGGGAACGTCCTCTTCCGCTCCTTCCGCAACTGAGGACCTCGACGAAATCAAGCAAGCCCTAACTCGCCAATTTTGGGGAATGGCCTCTTTCCTTGTTCCTCCCCCAACTGCCACGCCTTCTCAATCCGATCCTTCCCCATTCATTTCCAACCAATCCGATCATCGCGTTGTTTCTCCAAACGAAGAGCCACAGTTCGATGACGCAATTATGTCCAATCACTCTACCGACGGTGAACAGGGAACGGTTCGCACCGATCATCCTCAACCGAATTCGGTTTCGTCCCGATCCGATTCCGAAGAAAATCAGGAACCGGAACGTGCGGTTGGAATTACAGAAGAGGTGTTGGCCTTCGCCATGAATATCGCAATGCATCCCGAGACGTGGTTGGATTTTCCTATTGACGAGGAAGACGACACAGATGATTTTGACGTGTCCGATGCACAACAAGAGCATGCCGCAGTCATTGAAAGACTAACTCCTAGATTAGCTGCTCTCAGAATTGAACTATGTCCTTGCCATATGAGTGAAAGTTACTTCTGGAAAGTCTATTTTGTACTTTTGCATTCAAGACTTAATAAAGAAGATGCAGGGATTTTGTCCACACCACAGGTTATGGCAGCTAGAGCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCTGAATTTGAAATTTTTGGAAGAAGTACTTCCTACCCAAGAGACAATATGCACCATGATGATTATACCCCCAACTTATTAGATGATGCGTATTCTGATGACTTGCCTAATCGGACATATGAATGTAGAATAACCTCTTTATCCATGGTGGCAAATTATGTGACTGAGAAGCACACAGTTGAAAGTTCTGGAACAAATTTCATTGACAAGTCTGTTATTGAGGAAAATTCAATCATGAAAACTGACGACAGCAAGGATCTAAAATGTAGAAGACCCTCCCAAATCATTATTCAGGACTATGACGACGAAGATGATGAATGGCCTGAGGAAGATTCTGATTTAGGGGAATATGGTGGGACAATTCATCCCATGGTGAATGAAGAAGACATATCTTTCAGTGATCTCGAGGATGATGATTATGGCATTAAACCTGTTAGTTCCAATAAAGGTTCAAAGGTGGTGTGA 1350 0.443 MSWLARSLANSLRLDADGDVENDVVLDPPTSRDNAIRSKIHQEEEEQNEDQETQGRAGVREDLNEIKQTLTRQFWGTSSSAPSATEDLDEIKQALTRQFWGMASFLVPPPTATPSQSDPSPFISNQSDHRVVSPNEEPQFDDAIMSNHSTDGEQGTVRTDHPQPNSVSSRSDSEENQEPERAVGITEEVLAFAMNIAMHPETWLDFPIDEEDDTDDFDVSDAQQEHAAVIERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKEDAGILSTPQVMAARAMWMQELQKQTKPEFEIFGRSTSYPRDNMHHDDYTPNLLDDAYSDDLPNRTYECRITSLSMVANYVTEKHTVESSGTNFIDKSVIEENSIMKTDDSKDLKCRRPSQIIIQDYDDEDDEWPEEDSDLGEYGGTIHPMVNEEDISFSDLEDDDYGIKPVSSNKGSKVV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1445 449 MobiDBLite consensus disorder prediction 21 60 - -
Apr5g1445 449 MobiDBLite consensus disorder prediction 395 424 - -
Apr5g1445 449 ProSiteProfiles BSD domain profile. 214 266 IPR005607 -
Apr5g1445 449 SUPERFAMILY BSD domain-like 184 270 IPR035925 -
Apr5g1445 449 MobiDBLite consensus disorder prediction 430 449 - -
Apr5g1445 449 Pfam BSD domain 214 270 IPR005607 -
Apr5g1445 449 MobiDBLite consensus disorder prediction 34 60 - -
Apr5g1445 449 MobiDBLite consensus disorder prediction 106 181 - -
Apr5g1445 449 PANTHER BSD DOMAIN-CONTAINING PROTEIN 86 446 - -
Apr5g1445 449 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 79 - -
Apr5g1445 449 MobiDBLite consensus disorder prediction 140 172 - -
Apr5g1445 449 SMART wurzfinal6 214 266 IPR005607 -
Apr5g1445 449 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 79 - -
Apr5g1445 449 PANTHER BSD DOMAIN-CONTAINING PROTEIN 86 446 - -
Apr5g1445 449 Gene3D BSD domain 180 273 IPR035925 -
Apr5g1445 449 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1445 Apr-Chr5 18534865 18538722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1445 182 266 EF-hand Containing Proteins AT1G69030 29.474 4.15e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1445 - - gmx:100794286 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1445 5 18534865 18538722 Apr5g1445 5 18534865 18538722 ECH