Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1435 ATGGCACCACCCTTGTTCAATTGGGGGGTGAAAGAGGGTCACAGGGGAACTCCAGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTTGAACTTGAGGGTCCTTCAGAGGAAGACTTGCTAATCACCGACGCTTCGGGCATTCCAAGAGACAAAGGAAGAGGAAAAAACGCGAAGCAACTAACATGGGTTCTTCTCCTTAAAGCTCATAGAGCCGCGGGTTGCTTAACCTCTCTCGCACCTGCATTGTGGGGCCTAGTCTCCGCCGTGAAGCGCCGCGTGGCCTCCGGGAGAACCGACGCCGACACCGACACCGACGGAGGGAGGGAAAAGGAGAACCCCACCGTGAAAAGCAGGTTCTATTCGTGCATCAAAGCGTTTCTCTGGTTGTCAGTTTTCCTCTTGTGTTTCGAGGTTGCTGCGTATTTCAAGGGTTGGCATTTCGGTGGCGCGCGTCTTCAGTTGGAACATTTGTTGTGGGTACCCGCTTTTGGGGTTAAGGATTTCTTCGATTGGCTTTACGCGCGGTGGGTTTTGATTCGGGTGGAGTACCTCGCTCCTCCCCTGCAGTTTCTGACCAATGCGTGTATTGTGCTGTTTCTTATTCAGAGTTTGGATAGGCTTGTTCTGTGTTTGGGTTGTTTCTGGATCCGGTTTAAGAAGATCAAGCCTGTTCCAAAGGGTGGGGCTTTAGATCTTGAATCTGGAGAGAAGGGTTTTTTCCCCATGGTGCTAGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCTATTGCTGCCGTGTCTAATTTGGATTGGCCAAAGTCCAAGTTGTTGATTCAGGTTCTGGATGATTCGGATGACCCTACTACGCAGTTGCTGATCAAGGAGGAAGTGCAAAAGTGGCAGCAAGAGGGTGCCAACATTTTGTACCGACACCGTGTGATTAGAGATGGGTACAAGGCCGGTAATTTGAAATCTGCCATGAATTGTAGCTATGTCAAAGACTATGAGTTCGTTGCAATTTTTGATGCCGATTTTCAGCCTACCCCAGATTTCCTTAAAAAAACGGTTCCTCATTTTAAGGATAATGACGAATTGGGGCTTGTTCAGGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTTACAAGGTTGCAGAACATTAATCTGTCTTTCCATTTTGAGGTCGAACAGCAAGTGAATGGGATTTTCATCAATTTCTTTGGGTTCAATGGAACTGCTGGTGTGTGGAGAATAAAGGCTTTAGAAGATGCTGGTGGGTGGTTGGAGAGGACAACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTTCATGGCTGGAAATTCATTTTCCTCAATGATGTTGAGTGCCAGTGTGAGCTACCCGAATCTTATGAAGCTTACAGAAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTGCCTGATATCATACGGTCCAAGATAAGCGTGTGGAAGAAATTCAACATGATTTTTCTTTTCTTCCTTCTTAGAAAACTGATATTACCATTCTATTCATTCACACTGTTTTGTATAATTCTGCCTATGACAATGTTCGTACCGGAAGCTGAGCTTCCAGCATGGGTTGTTTGCTACATCCCTGCTGCCATGTCATTTCTCAACATTCTTCCAGCTCCAAAAGCCTTCCCCTTTATTGTCCCTTATCTCCTATTTGAAAATACCATGTCGGTTACCAAATTCAATGCCATGATCTCTGGCCTATTCCAGCTCGGGAGTGCATACGAGTGGGTGGTCACTAAGAAATCGGGTCGTTCCTCGGAGGGTGATCTGGTTTCATTGATTGGAAAAGGACCAAAGCATCAAAGAGGGTCATCAGAACCTGATCTGGAGGGAATGAAAGAGGAACTTCGAAGGCAAGCGCAGCAGAAGGTGTCTAAGAAGAAGAAAAAGCATAATAGAATATATGTGAAGGAGCTTTCTTTGGCCTTTCTACTTCTAACAGCCTCAGCAAGGAGTCTCCTCTCTGCTCAGGGGATTCACTTTTACTTTCTGCTATTCCAGGGCATATCATTCCTTTTAGTTGGTCTAGACTTGATTGGTGAACAAGTGGACTAA 2115 0.4619 MAPPLFNWGVKEGHRGTPVVVKMENPNWSMVELEGPSEEDLLITDASGIPRDKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALWGLVSAVKRRVASGRTDADTDTDGGREKENPTVKSRFYSCIKAFLWLSVFLLCFEVAAYFKGWHFGGARLQLEHLLWVPAFGVKDFFDWLYARWVLIRVEYLAPPLQFLTNACIVLFLIQSLDRLVLCLGCFWIRFKKIKPVPKGGALDLESGEKGFFPMVLVQIPMCNEKEVYQQSIAAVSNLDWPKSKLLIQVLDDSDDPTTQLLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIGKGPKHQRGSSEPDLEGMKEELRRQAQQKVSKKKKKHNRIYVKELSLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1435 704 PANTHER - 11 703 - -
Apr5g1435 704 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 11 703 - -
Apr5g1435 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 460 IPR029044 -
Apr5g1435 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 245 522 IPR029044 -
Apr5g1435 704 Coils Coil 629 653 - -
Apr5g1435 704 Pfam Glycosyl transferase family group 2 337 533 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1435 Apr-Chr5 18425262 18428920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1435 4 704 Miscellaneous Gene Families AT4G07960 77.871 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1435 - - gmx:100805969 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1435 5 18425262 18428920 Apr5g1435 5 18425262 18428920 ECH