Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1431 ATGTATAATAATAATAATAATAATAATAATAAGTTATCTAGGAAGGCTAGTCACGACTCTCATGGCCAAGACTCTTCTTACTTTCTTGGATGGCAAGAATATGAGAAGAATCCTTATCACCCCATTCATAATCCATCTGGGATCATTCAGATGGGGCTTGCTGAGAATCAGCTTTCATTTGACCTTCTTGAATCATGGCTTCAAAGAAACCCTGACATAGTGGGGTTGAAGAAAGATGGGGCATCCATATTTAGAGAACTTGCTCTATTCCAGGATTACCACGGCTTGCCTGCTTTCAAAAATGAAATGGTGGACTTTATGGCAAAAATAAGAGGAAATAGAGTCAAATTTGCTTCGGAGAGGCTTGTCCTCACAGCTGGCGCAACTCCTGCAAATGAGATTCTGATGTTTTGCCTTGCTAATCCAGGGGAAGCTTTCATTCTTCCCACACCTTATTATCCTGGGTTTGATAGAGATCTAAAGTGGCGAACAGGGGTTGAGATTGTCCCAATGCATGGCTCCAGCTCAAACGGTTTCAGAATCACTTCCTCTGCTTTAGAACAAGCTTATCAACAAGCACAAAAACTGAGCCTCAAAGTCAAAGGGGTCCTAGTAACTAACCCCTCCAACCCACTGGGCATAACCATGACCAAAACCGAACTCAACCACCTCCTCGATTTCGCCATCGACAAGAACATCCACATAATAAGCGACGAGATCTACTCAGGAACAGTCTTCGACTCACCCGGGTTCGTAAGCATCATGGAAGTAGTCAACGACAGAATTAGCCAACACGGGAACGCCGTTTTGAACCGCATTCACGTCGTTTATAGTCTTTCAAAAGATCTTGGCGTTCCGGGGTTTCGCGTTGGAATGGTTTACTCGAACAACGAAACGGTTGTCGCTGCTGCCACCAAAATGTCAAGCTTCGGATTGGTGTCTTCGCAAACGCAGTATTTGCTTGCGAACTTACTGAGAGACAAGAAATTCACTTTGGAATACATGGAAGAGACTCAGAAGAGACTGAAGATGCGCAAGGAGATGCTTGTTTGTGGCCTCGGAAACGCAGGGATTGGGTGCTTGAAGAGCAATGCAGGGTTGTTCTGTTGGGTGGACATGAGGCATTTGTTAAGTTCCAAAACTTTTGAGGCAGAGAAGGAGCTTTGGATGAAGATTCTTTGCCACGTTGGTTTGAACATTTCTCCTGGATCTTCTTGCCACTGCTCCGAACCTGGCTGGTTCAGGATTTGCTTCGCCAACATGTCCGAAGACACGTTGCAAGTTGCAATGCGACGAATGAAGGCTTTTACGACACAAGTAACATCTGTTATTGACACTCATACAGTGCTACCAATTATACAACAACAAGGTCAATTTCTTAGTGGCTTTTCCACTTACGTATGA 1404 0.4423 MYNNNNNNNNKLSRKASHDSHGQDSSYFLGWQEYEKNPYHPIHNPSGIIQMGLAENQLSFDLLESWLQRNPDIVGLKKDGASIFRELALFQDYHGLPAFKNEMVDFMAKIRGNRVKFASERLVLTAGATPANEILMFCLANPGEAFILPTPYYPGFDRDLKWRTGVEIVPMHGSSSNGFRITSSALEQAYQQAQKLSLKVKGVLVTNPSNPLGITMTKTELNHLLDFAIDKNIHIISDEIYSGTVFDSPGFVSIMEVVNDRISQHGNAVLNRIHVVYSLSKDLGVPGFRVGMVYSNNETVVAAATKMSSFGLVSSQTQYLLANLLRDKKFTLEYMEETQKRLKMRKEMLVCGLGNAGIGCLKSNAGLFCWVDMRHLLSSKTFEAEKELWMKILCHVGLNISPGSSCHCSEPGWFRICFANMSEDTLQVAMRRMKAFTTQVTSVIDTHTVLPIIQQQGQFLSGFSTYV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1431 467 MobiDBLite consensus disorder prediction 1 24 - -
Apr5g1431 467 CDD AAT_like 71 435 - -
Apr5g1431 467 Gene3D Aspartate Aminotransferase, domain 1 37 432 IPR015422 GO:0003824
Apr5g1431 467 Gene3D - 71 327 IPR015421 GO:0003824
Apr5g1431 467 Pfam Aminotransferase class I and II 49 432 IPR004839 GO:0009058|GO:0030170
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 51 77 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 84 100 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 121 141 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 164 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 221 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 256 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 272 296 - -
Apr5g1431 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 304 327 - -
Apr5g1431 467 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 12 446 - -
Apr5g1431 467 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 278 291 IPR004838 GO:0003824|GO:0009058|GO:0030170
Apr5g1431 467 SUPERFAMILY PLP-dependent transferases 17 436 IPR015424 -
Apr5g1431 467 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 12 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1431 Apr-Chr5 18382477 18392574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1431 K01762 - gmx:100803507 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1431 5 18382477 18392574 Apr5g1431 5 18382477 18392574 ECH