Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1420 ATGGGGAGAAGTACGGTTGGAACGTTGCTGCTTTGGCTCTTCTTTGTACTGAGTATGAGACCAGATTTCAGAGCCAAAGCAAAAAAAGAACCACCTTCAGAAATTGAAATCGAGGCCAAATTAAAGCTCCTCAACAAGCCTGCGTTGAAAACTATTAAGAGTGAAGATGGAGATATTATTGACTGCGTTGATATTTACAAACAACCTGCATTTGATCATCCTGCCTTAAAAAATCATACTATCAAGATGATACCAGATTTTTTTAGAGAATCCCAAAATTCAAGCTCAAAAAATGGTTCCCAGTCAAAGACATTTATACTTCAGACATGGCAGAAGAGTGGAAGTTGTCCAAAAGGAACTGTCCCTATTCGCAGAATTCTAAAGGAGGACTTACTTAGAGCTGCTTCTCTCGACCGCTTCGGACGGAAACCCCCAGCAGTATTTAAGAATTCAACAAATAGCTACAACCTTAATTTCCCCAACTTCAATGCCACCAATAAATTTATTCCTGAAAATCGATCGGCAGCATATCTTGTGACAATGGGATACAATTATATAGGTGCAGAAGCAGATATTAACACTTGGACTCCAAAGGTGGACCTGCCAGATGATTTCACCACTGCTCAAATTTGGCTCAAGGCCAACAATGGTCCTGTATTTGAAAGCGTTGAAGCAGGCTGGACGGTGAATCCCAAGTTATACGGTGACATGGCCACTCGATTGTTTGCCTACTGGACTAGGGATTCATACGAGTCAATAGGATGCTTTGATCTTACTTGCCCAGGGTTTGTGCAAGTACAACGAGTCTTAACGCTTGGTACTGCCATAACAGCTATCTCCTCCAAATTTGGCAGACAGTTTGACTTAAATGTTGGAATGTTCTGGGATGATGCAGGGAATTGGTGGCTTAGAGTAAACAAGGACATGCCGATAGGTTATTGGCCCGCGGAAATATTGGGCAATTTAAAACACAGTGCCATATTGGTTGAATGGGGTGGACAAGTATTTAGTACAAAGTTAAAGAAGGAAACCCCTCACACGGGAACTGGGATGGGAAGTGGTGATTTCGCAAATGGTCTAATGGGGGAAGCATGCTACATGAACAATGTGAGGATAAAGGATTATTCGCTTTCTCTTAAGTACCCTGAATTTGTGAGTGCAATGGCTGATGAACCCTATTGCTACAACTCCCTCAATGATGTTAAATATGGAGTGGAGCCTACATTTTATTTTGGAGGGCCAGGACGAAGGCCTCCCTATTGTCCTTGA 1269 0.4224 MGRSTVGTLLLWLFFVLSMRPDFRAKAKKEPPSEIEIEAKLKLLNKPALKTIKSEDGDIIDCVDIYKQPAFDHPALKNHTIKMIPDFFRESQNSSSKNGSQSKTFILQTWQKSGSCPKGTVPIRRILKEDLLRAASLDRFGRKPPAVFKNSTNSYNLNFPNFNATNKFIPENRSAAYLVTMGYNYIGAEADINTWTPKVDLPDDFTTAQIWLKANNGPVFESVEAGWTVNPKLYGDMATRLFAYWTRDSYESIGCFDLTCPGFVQVQRVLTLGTAITAISSKFGRQFDLNVGMFWDDAGNWWLRVNKDMPIGYWPAEILGNLKHSAILVEWGGQVFSTKLKKETPHTGTGMGSGDFANGLMGEACYMNNVRIKDYSLSLKYPEFVSAMADEPYCYNSLNDVKYGVEPTFYFGGPGRRPPYCP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1420 422 Pfam Neprosin 203 414 IPR004314 -
Apr5g1420 422 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 27 418 - -
Apr5g1420 422 Gene3D - 183 307 - -
Apr5g1420 422 PANTHER ASLB (DUF239)-RELATED 27 418 - -
Apr5g1420 422 Pfam Neprosin activation peptide 51 149 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1420 Apr-Chr5 18269418 18272510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1420 - - gmx:100804570 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0323 9 4258373 4262707 Apr5g1420 5 18269418 18272510 PCT