LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1418	ATGGGCATCGACCGTTTTCTGATCCTCTTTCTGGTAGCCACCCTCGTCTCCGGTCACGGCGACGATCTCATCAGATTGCCCTCCCAAGCTTCCAGATTCTTCCAACCTCCTTCTGTGGAGGAAAATGAAGAGGGCACGAGGTGGGCCGTTTTAATTGCCGGTTCCAATGGCTACTGGAATTACAGGCATCAGTCTGATGTCTGTCATGCGTATCAACTACTGAGAAAAGGAGGCCTAAAAGAAGAAAACATCATTGTATTTATGTATGATGACATTGCTTACAACGAAGAGAACCCCAGGCCTGGAGTCATCATTAACAGCCCACATGGAAATGATGTTTACAAAGGAGTCCCTAAGGATTACGTTGGTGAACATGTTACTGTTAACAACTTTTTTGCTGCTATACTTGGAAATAAGTCAGCTCTTATTGGTGGCAGTGGGAAGGTTGTGGATAGTGGTCCAAATGATCATATATTTATATACTACTCTGATCATGGGGGTCCAGGAGTGCTTGGGATGCCTACTAATCCGTACATGTATGCATCTGATCTGATAGAAGTCTTAAAGAAAAAGCATGCTTCTGGAACATATAAAAGCCTAGTATTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTCTGAATATCTATGCTACGACTGCTTCAAATGCAGAAGAAAGCAGTTGGGGAACATATTGTCCTGGGGAGTCTCCTAGTCCTCCCCCAGAATATGAAACCTGCCTGGGTGACCTGTACAGTGTTGCGTGGATGGAAGACAGTGACATACACAATTTGCGAACAGAAACTCTACATCAACAATATGAATTGGTTAAAGACAGGACTCTCAATGGAAATTCACTTTATGGTTCCCACGTGATGCAGTATGGTGACATAGAGCTTAGCAAGAATAATCTCTTCCTATATTTGGGTACAAATCCCGCTAATGATAATTTTACTTTTGTGGATAAAAACTCATTGGTGCCACCTTCAAAGGCAGTCAACCAACGTGATGCGGATCTCGTTCATTTCTGGGATAAGTTCCGCAAAGCTCCTGAGGGTTCTGCTAGGAAAGCTGCGGCTGAGAAACAAGTTCTGGAAGCAATGTCTCACAGAATGCATATAGACAACAGCGTGAAACTTATTGGAAAGCTCTTATTTGGCATTGAAAAGGCTCCAGAAGTGCTAAGGAGTGTTAGACCTGCTGGGCAACCCCTTGTTGATGACTGGGACTGCCTTAAAACACTGGTTAGGACTTTTGAGACACATTGTGGGTCCCTGTCTCAGTATGGGATGAAGCATATGAGGTCCTTTGCAAACTTCTGCAACGCTGGAATACAGAAAGACCAAATGGCTGAGGCCTCAGCACAAGCCTGCGTCAGTATTCCTGCAACTCCCCGGAGTTCTCTGCACAGCGGTTTCAGTGCATAA	1449	0.4451	MGIDRFLILFLVATLVSGHGDDLIRLPSQASRFFQPPSVEENEEGTRWAVLIAGSNGYWNYRHQSDVCHAYQLLRKGGLKEENIIVFMYDDIAYNEENPRPGVIINSPHGNDVYKGVPKDYVGEHVTVNNFFAAILGNKSALIGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTNPYMYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTASNAEESSWGTYCPGESPSPPPEYETCLGDLYSVAWMEDSDIHNLRTETLHQQYELVKDRTLNGNSLYGSHVMQYGDIELSKNNLFLYLGTNPANDNFTFVDKNSLVPPSKAVNQRDADLVHFWDKFRKAPEGSARKAAAEKQVLEAMSHRMHIDNSVKLIGKLLFGIEKAPEVLRSVRPAGQPLVDDWDCLKTLVRTFETHCGSLSQYGMKHMRSFANFCNAGIQKDQMAEASAQACVSIPATPRSSLHSGFSA*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1418	482	PIRSF	AE	3	482	IPR043577	GO:0004197\|GO:0051603
	Apr5g1418	482	Gene3D	-	342	470	IPR046427	-
	Apr5g1418	482	PIRSF	Legumain	2	482	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	Pfam	Peptidase C13 family	47	317	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PANTHER	VACUOLAR-PROCESSING ENZYME	7	481	-	-
	Apr5g1418	482	Gene3D	-	45	341	-	-
	Apr5g1418	482	PRINTS	Hemoglobinase (C13) cysteine protease signature	48	72	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PRINTS	Hemoglobinase (C13) cysteine protease signature	73	102	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PRINTS	Hemoglobinase (C13) cysteine protease signature	120	135	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PRINTS	Hemoglobinase (C13) cysteine protease signature	148	167	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PRINTS	Hemoglobinase (C13) cysteine protease signature	197	213	IPR001096	GO:0006508\|GO:0008233
	Apr5g1418	482	PANTHER	HEMOGLOBINASE FAMILY MEMBER	7	481	IPR001096	GO:0006508\|GO:0008233

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1418	Apr-Chr5	18246613	18252508	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1418	K01369		-	gmx:100791675	880.937

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g0319	9	4188165	4194200	Apr5g1418	5	18246613	18252508	PCT