Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1411 ATGGCGGATTCAGTGTCGGTGGACATGGAACCCTTCTCTCCTCCACCCGAGGAGCATCTTGTGAAAACTCGTTATGGTTGTGTCTCAGTTGCTGTGTATGGAGACCAGGACAAGCCAGCTCTTATCACTTACCCTGATTTGGCTTTAAATTATGTCTCATGCTTTCAGGGGTTATTATTTTGTCCAGAAGCCTGTTCACTGCTGCTTCACAGTTTCTGCATATATCACATCAGTCCCCCAGGGCATGAGTTGGGAGCTGCTGCGATTGATCCAGATGATCCAATTCTTTCAGCTGATGATTTAGCCGATCAAATTGCTGATGTTCTTAACTTTTTTGGTCTTAGTGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTGTTTGCTATGAAATATAGACACCGTGTTGTTGGTTTGATACTTGTTTCTCCTCTATGCAAAGCACCATCTTGGACTGAATGGTTGTACAACAAGGTCGTGTCAAATTTACTCTACTTTTATGGTATGTGCGGGGTGGTAAAAGAAATATTGCTAAAGCGATACTTTGGCAAGGATGTTCGAGGGAGTGCTAATTTGCCAGATTCCGATATAGTTCAATCATTGGATGAGAGGCAGAGTTTGAATGTGTGGCGGTTCCTTGAAGCAATTAATGGGAGATCTGACATAAGTGAAGGATTGAGAAAATTACAGTGTCGTTCTCTAATTTTTGTTGGGGATATGTCTCCTTTTCACTGTGAGGCTCTCCATATGGCATCTAAGTTAGATAGACGATTCAGTGCCTTAGTCGAGGTTCAAGCGTGTGGGTCAATGGTAACAGAGGAGCAGCCTCAAGCTATGTTGATACCAATGGAGTACTTTCTCATGGGATATGGCTTGTACAGGCCGTCTAAGCCAAGCGTCAGCCCAAGAAGTCCCTTGAGTCCATCTTGCATTTCCCCAGAGCTCTACTCACCAGAGAGTATGGGTTTGAAATTAAAACCAATAAAAACACGAATTTCCGTGGAAATTTAG 1023 0.435 MADSVSVDMEPFSPPPEEHLVKTRYGCVSVAVYGDQDKPALITYPDLALNYVSCFQGLLFCPEACSLLLHSFCIYHISPPGHELGAAAIDPDDPILSADDLADQIADVLNFFGLSAVMCMGVTAGAYILTLFAMKYRHRVVGLILVSPLCKAPSWTEWLYNKVVSNLLYFYGMCGVVKEILLKRYFGKDVRGSANLPDSDIVQSLDERQSLNVWRFLEAINGRSDISEGLRKLQCRSLIFVGDMSPFHCEALHMASKLDRRFSALVEVQACGSMVTEEQPQAMLIPMEYFLMGYGLYRPSKPSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISVEI* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1411 340 PANTHER N-MYC DOWNSTREAM REGULATED 2 340 IPR004142 -
Apr5g1411 340 Pfam Ndr family 18 298 IPR004142 -
Apr5g1411 340 Gene3D alpha/beta hydrolase 14 293 IPR029058 -
Apr5g1411 340 PANTHER PROTEIN NDL2 2 340 - -
Apr5g1411 340 SUPERFAMILY alpha/beta-Hydrolases 25 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1411 Apr-Chr5 18202943 18207532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1411 - - gmx:100804729 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0314 9 4109971 4112994 Apr5g1411 5 18202943 18207532 PCT