Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1409 ATGGCCTCAGAATCTCAGGCTCATTTAGGTCTAACTCCAGAGGAATTCGCTGAACTCGAAACCATAATCAACACACACCACAAATTCGAGCCTTCTTCCCCAAACATTTGCACTTCCATCATAACGCAACGCATCGACGCTCCACTGTGCACGGTGTGGCCCTTCGTTCGAAGCTTCGAGAACCCGCAAAAGTACAAGCACTTCGTCAAGAGCTGCAACATGAGAGGTGACGGTGGCGTTGGCAGCATCAGAGAGGTCACCGTGGTTTCGGGTCTCCCAGCCTCCACCAGCACCGAGAGGCTCGAGATTCTCGACGACGACAAGCACTTACTCAGCTTTCGCGTCGTTGGTGGCGAACACAGGCTTCAGAATTATCGCTCCGTTACGTCGGTGAACGAATTCAAGAGGGAAGGGAAAGTGTATACTATTGTTCTGGAGTCTTATATGGTTGACATACCAGAAGGAAACACCGGAGAGGACACTAAGATGTTTGTTGACACTGTGGTGAAGCTTAACCTTCAGAAACTCGGGGTCGTGGCTATGGCTGCCCCAGTGCATGGACAACCACAGTGA 573 0.5113 MASESQAHLGLTPEEFAELETIINTHHKFEPSSPNICTSIITQRIDAPLCTVWPFVRSFENPQKYKHFVKSCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHLLSFRVVGGEHRLQNYRSVTSVNEFKREGKVYTIVLESYMVDIPEGNTGEDTKMFVDTVVKLNLQKLGVVAMAAPVHGQPQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1409 190 CDD PYR_PYL_RCAR_like 37 176 - -
Apr5g1409 190 Pfam Polyketide cyclase / dehydrase and lipid transport 42 176 IPR019587 -
Apr5g1409 190 Gene3D - 1 188 IPR023393 -
Apr5g1409 190 PANTHER - 14 183 - -
Apr5g1409 190 SUPERFAMILY Bet v1-like 37 180 - -
Apr5g1409 190 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 14 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1409 Apr-Chr5 18193175 18193854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1409 K14496 - gmx:100794619 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0312 9 4079652 4080346 Apr5g1409 5 18193175 18193854 PCT