Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1404 ATGACAGACCCATCATCCAAACCCAACGGAAACGGCGCAATTAACGGCGCCGCCACCGCTAACGGCAATCCCGGCCCCGTTAAATCCCAACTCTACAACCCAAACCGTCAACTTTACCGGCCGCAATCTCACTACCACCGCCGTCAACGCTCCCACCGGAACCTCTGTTGTTGCTGCTGCTTCTGGACCATCCTCACCGTCCTCGCCGTGGCGCTCCTCGCCGCCATTGTCGGAGCCGCACTGTACGTACTGTACCGTCCTCATCGACCCGAATTCTCCATCACAAACCTCCGCATTGCGAAGATGAACCTCACCACTTCCAGCGACTCACCCTCTCACCTCACCACACTCTTCAACCTCACCCTCATCGCTAAGAACCCCAACAACCACCTCGTTTTCTTCTACGACCCCTTCACCGTCACCGTCTTCTCTAACTCCGTCCCCATCGGAAACGGGTCTCTCACGGCGTTTACTTCCGACAAGAACAACCAGACGAGTCTCCGAACGGTGCTGTCGGGTTCCCAAGATCTGGACACGGACTCGTTGACTAGCCTCAGATCGGGTCTGAAGAACAAGAAGGGTTTCCCCGTTGAGATTCAGATGGATACTAAGGTCAAAATGAAGATGGATTGGCTCAAGAGCAAGAAGGTTGGAATTAGAGTCACCTGTGACGGAATCAAAGGTTCGGTTCCCGCCGGTAAGTCTCCGGCGATCGCTTCCGTCATTGACTCTGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTCTCTTTTTAG 780 0.541 MTDPSSKPNGNGAINGAATANGNPGPVKSQLYNPNRQLYRPQSHYHRRQRSHRNLCCCCCFWTILTVLAVALLAAIVGAALYVLYRPHRPEFSITNLRIAKMNLTTSSDSPSHLTTLFNLTLIAKNPNNHLVFFYDPFTVTVFSNSVPIGNGSLTAFTSDKNNQTSLRTVLSGSQDLDTDSLTSLRSGLKNKKGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIKGSVPAGKSPAIASVIDSECKVDLRIKIWKFSF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1404 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 258 - -
Apr5g1404 259 SUPERFAMILY LEA14-like 72 208 - -
Apr5g1404 259 PANTHER HARPIN-INDUCED PROTEIN 7 258 - -
Apr5g1404 259 MobiDBLite consensus disorder prediction 1 30 - -
Apr5g1404 259 Gene3D - 83 222 - -
Apr5g1404 259 Pfam Late embryogenesis abundant protein 124 223 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1404 Apr-Chr5 18153413 18154729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1404 34 252 EF-hand Containing Proteins AT5G21130 28.509 4.21e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1404 - - gmx:100786652 447.973